Detailed information NTG0997664

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: ELZ56_RS08465
• Genome accession: NZ_LR134093
• Coordinates: 1711834..1712436 (-)
• Length: 200 a.a.
• NCBI ID: WP_000271546.1
• Uniprot ID: Q6GG62
• Organism: Staphylococcus aureus strain NCTC11965
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1706834..1717436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ56_RS08445 (NCTC11965_01600)	yajC	1708330..1708590 (-)	261	WP_001160682.1	preprotein translocase subunit YajC	-
ELZ56_RS08450 (NCTC11965_01601)	tgt	1708609..1709748 (-)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
ELZ56_RS08455 (NCTC11965_01602)	queA	1709771..1710796 (-)	1026	WP_001019178.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
ELZ56_RS08460 (NCTC11965_01603)	ruvB	1710798..1711802 (-)	1005	WP_001005767.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ELZ56_RS08465 (NCTC11965_01604)	ruvA	1711834..1712436 (-)	603	WP_000271546.1	Holliday junction branch migration protein RuvA	Machinery gene
ELZ56_RS08470 (NCTC11965_01605)	-	1712450..1712905 (-)	456	WP_000368902.1	ACT domain-containing protein	-
ELZ56_RS08475 (NCTC11965_01606)	obgE	1712918..1714210 (-)	1293	WP_000496098.1	GTPase ObgE	-
ELZ56_RS08480 (NCTC11965_01607)	rpmA	1714562..1714846 (-)	285	WP_000916187.1	50S ribosomal protein L27	-
ELZ56_RS08485 (NCTC11965_01608)	-	1714858..1715178 (-)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
ELZ56_RS08490 (NCTC11965_01609)	rplU	1715184..1715492 (-)	309	WP_000457386.1	50S ribosomal protein L21	-
ELZ56_RS08495 (NCTC11965_01610)	mreD	1715785..1716315 (-)	531	WP_001259929.1	rod shape-determining protein MreD	-
ELZ56_RS08500 (NCTC11965_01611)	mreC	1716315..1717157 (-)	843	WP_000911041.1	rod shape-determining protein MreC	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22292.44 Da
• Isoelectric Point: 5.6716

>NTDB_id=997664 ELZ56_RS08465 WP_000271546.1 1711834..1712436(-) (ruvA) [Staphylococcus aureus strain NCTC11965]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTEQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=997664 ELZ56_RS08465 WP_000271546.1 1711834..1712436(-) (ruvA) [Staphylococcus aureus strain NCTC11965]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCATACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTCACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACACCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATCA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACATCGACGGAGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA, C-terminal domain (RuvA_C) (156-197)

• RuvA N terminal domain (RuvA_N) (1-61)

3D structure

• AlphaFold DB: Q6GG62

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	46.231	99.5	0.46
ruvA	Streptococcus pneumoniae R6	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae D39	45.729	99.5	0.455
ruvA	Bacillus subtilis subsp. subtilis str. 168	42.714	99.5	0.425