Detailed information
Bioinformatically predicted
Overview
| Name | comM | Type | Regulator |
| Locus tag | ABC806_RS01655 | Genome accession | NZ_CP155539 |
| Coordinates | 315149..315769 (+) | Length | 206 a.a. |
| NCBI ID | WP_000839908.1 | Uniprot ID | A0A0B7M636 |
| Organism | Streptococcus pneumoniae TIGR4 | ||
| Function | fratricide immunity (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 304408..325071 | 315149..315769 | within | 0 |
Gene organization within MGE regions
Location: 304408..325071
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC806_RS01610 (ABC806_01610) | - | 304408..305820 (-) | 1413 | WP_000699968.1 | S8 family serine peptidase | - |
| ABC806_RS01615 (ABC806_01615) | - | 305844..307952 (-) | 2109 | WP_000701298.1 | peptidase domain-containing ABC transporter | - |
| ABC806_RS01620 (ABC806_01620) | - | 307949..308878 (-) | 930 | WP_000912954.1 | M50 family metallopeptidase | - |
| ABC806_RS01625 (ABC806_01625) | - | 308859..309563 (-) | 705 | WP_001033170.1 | flavodoxin family protein | - |
| ABC806_RS01630 (ABC806_01630) | lanM | 309913..312903 (-) | 2991 | WP_000875573.1 | type 2 lanthipeptide synthetase LanM | - |
| ABC806_RS01635 (ABC806_01635) | pneA2 | 313019..313207 (-) | 189 | WP_000786759.1 | two-peptide bacteriocin subunit PneA2 | - |
| ABC806_RS01640 (ABC806_01640) | pneA1 | 313214..313438 (-) | 225 | WP_000181087.1 | two-peptide bacteriocin subunit PneA1 | - |
| ABC806_RS01645 (ABC806_01645) | - | 313541..313711 (-) | 171 | WP_001227862.1 | PhrA family quorum-sensing system peptide | - |
| ABC806_RS01650 (ABC806_01650) | - | 313903..314766 (+) | 864 | WP_001093641.1 | helix-turn-helix transcriptional regulator | - |
| ABC806_RS01655 (ABC806_01655) | comM | 315149..315769 (+) | 621 | WP_000839908.1 | hypothetical protein | Regulator |
| ABC806_RS01660 (ABC806_01660) | tsaE | 315855..316298 (+) | 444 | WP_000288232.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| ABC806_RS01665 (ABC806_01665) | - | 316288..316806 (+) | 519 | WP_000455537.1 | GNAT family N-acetyltransferase | - |
| ABC806_RS01670 (ABC806_01670) | - | 316814..317830 (+) | 1017 | WP_000239283.1 | LCP family protein | - |
| ABC806_RS01675 (ABC806_01675) | cinA | 317915..319171 (+) | 1257 | WP_000642718.1 | competence/damage-inducible protein A | Machinery gene |
| ABC806_RS01680 (ABC806_01680) | recA | 319226..320392 (+) | 1167 | WP_001085462.1 | recombinase RecA | Machinery gene |
| ABC806_RS01685 (ABC806_01685) | - | 320698..322068 (+) | 1371 | WP_001036271.1 | MATE family efflux transporter | - |
| ABC806_RS01690 (ABC806_01690) | lytA | 322444..323400 (+) | 957 | WP_000405234.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| ABC806_RS01695 (ABC806_01695) | - | 323758..323919 (+) | 162 | WP_000289348.1 | helix-turn-helix transcriptional regulator | - |
| ABC806_RS01700 (ABC806_01700) | - | 323906..324112 (+) | 207 | WP_000366093.1 | hypothetical protein | - |
| ABC806_RS01705 (ABC806_01705) | - | 324158..324517 (+) | 360 | WP_000749819.1 | hypothetical protein | - |
| ABC806_RS01710 (ABC806_01710) | - | 324646..325071 (+) | 426 | WP_000204063.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 23552.72 Da Isoelectric Point: 10.1254
>NTDB_id=997556 ABC806_RS01655 WP_000839908.1 315149..315769(+) (comM) [Streptococcus pneumoniae TIGR4]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF
Nucleotide
Download Length: 621 bp
>NTDB_id=997556 ABC806_RS01655 WP_000839908.1 315149..315769(+) (comM) [Streptococcus pneumoniae TIGR4]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTGGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTGGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comM | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comM | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comM | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comM | Streptococcus mitis NCTC 12261 |
38.974 |
94.66 |
0.369 |
| comM | Streptococcus mitis SK321 |
38.974 |
94.66 |
0.369 |