Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AAH687_RS08825 Genome accession   NZ_CP155530
Coordinates   1772646..1774952 (+) Length   768 a.a.
NCBI ID   WP_035389261.1    Uniprot ID   -
Organism   Bacillus altitudinis strain TN5S8     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1767646..1779952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH687_RS08800 (AAH687_08800) - 1769147..1770373 (+) 1227 WP_046526550.1 HDOD domain-containing protein -
  AAH687_RS08805 (AAH687_08805) - 1770410..1770763 (-) 354 WP_017358939.1 hypothetical protein -
  AAH687_RS08810 (AAH687_08810) degQ 1771269..1771409 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  AAH687_RS08815 (AAH687_08815) - 1771561..1772484 (+) 924 WP_035389264.1 polyprenyl synthetase family protein -
  AAH687_RS08820 (AAH687_08820) comX 1772462..1772632 (+) 171 WP_017358941.1 competence pheromone ComX -
  AAH687_RS08825 (AAH687_08825) comP 1772646..1774952 (+) 2307 WP_035389261.1 ATP-binding protein Regulator
  AAH687_RS08830 (AAH687_08830) comA 1775033..1775674 (+) 642 WP_007500477.1 response regulator transcription factor Regulator
  AAH687_RS08835 (AAH687_08835) - 1775698..1776087 (+) 390 WP_008345855.1 hotdog fold thioesterase -
  AAH687_RS08840 (AAH687_08840) mnhG 1776178..1776552 (-) 375 WP_008345852.1 monovalent cation/H(+) antiporter subunit G -
  AAH687_RS08845 (AAH687_08845) - 1776536..1776817 (-) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  AAH687_RS08850 (AAH687_08850) - 1776817..1777296 (-) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  AAH687_RS08855 (AAH687_08855) - 1777303..1778781 (-) 1479 WP_346395585.1 Na+/H+ antiporter subunit D -
  AAH687_RS08860 (AAH687_08860) - 1778774..1779115 (-) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  AAH687_RS08865 (AAH687_08865) - 1779115..1779546 (-) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88592.27 Da        Isoelectric Point: 8.2943

>NTDB_id=996949 AAH687_RS08825 WP_035389261.1 1772646..1774952(+) (comP) [Bacillus altitudinis strain TN5S8]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSHGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISAFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVLFDFIQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSIFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKEYVDQFQDILGEVGKIIG
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDDGV
GFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=996949 AAH687_RS08825 WP_035389261.1 1772646..1774952(+) (comP) [Bacillus altitudinis strain TN5S8]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATCCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAGGAAAATAGTCACGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGGAAAGGCGATATCATACTTGAAGTGAATGGGAATAAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGAGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAAATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTGACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCAGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTCTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCAGCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCGTATGTTGTTGCATCGTTTGTTCTTTTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGCTATATAATGTTGATTTCTTTATGGGAAGGATTAAATACTACGGTTTTTTAGCAATTACACCGACAATACT
AGTGGTTGTTCTTTTTGATTTTATTCAAAAGCCAAATGCAAATTTCTATACAGTGAAATTTACGATTATCACGTACATTC
TTATGCTTACCGTTTTCTACTTTAAAGAAATTATCGATTTCCGTTTTCGATTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTATATTTAAATTCACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGAGTATGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGTAAAATCATCGGG
CTTGATAAAGGGTTTATGATGAAAATTGGTGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTACGGAC
ACCTAAGCTGACCCGCGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCA
AGATTGAAGAATTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTCATGTTC
GCCATGGAAGAGAAGCAGCGTTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACTGAAGAG
ACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCACAGCTCCTCTATGATTTGGGGTTA
GTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCGCTTTGA
TAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGTTGAAGC
ATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGATGGAGTC
GGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGCTCTAAA
TGGAAAGCTTCAAATTCACACGGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.292

100

0.499


Multiple sequence alignment