Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ELZ47_RS09995 Genome accession   NZ_LR134002
Coordinates   2010384..2012717 (-) Length   777 a.a.
NCBI ID   WP_125330887.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2005384..2017717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS09975 (NCTC10904_01956) - 2006129..2007466 (-) 1338 WP_125330891.1 alanine/glycine:cation symporter family protein -
  ELZ47_RS09980 (NCTC10904_01958) trxA 2007811..2008125 (-) 315 WP_125330890.1 thioredoxin -
  ELZ47_RS09985 (NCTC10904_01959) - 2008210..2009628 (-) 1419 WP_125330889.1 C69 family dipeptidase -
  ELZ47_RS09990 (NCTC10904_01960) - 2009729..2010373 (-) 645 WP_125330888.1 GNAT family N-acetyltransferase -
  ELZ47_RS09995 (NCTC10904_01961) mutS/mutS2 2010384..2012717 (-) 2334 WP_125330887.1 endonuclease MutS2 Machinery gene
  ELZ47_RS10000 (NCTC10904_01962) - 2012772..2013323 (-) 552 WP_002903748.1 CvpA family protein -
  ELZ47_RS10005 (NCTC10904_01963) - 2013334..2013624 (-) 291 WP_002919703.1 hypothetical protein -
  ELZ47_RS10010 (NCTC10904_01964) rnhC 2013813..2014703 (+) 891 WP_164549610.1 ribonuclease HIII -
  ELZ47_RS10015 (NCTC10904_01965) lepB 2014707..2015336 (+) 630 WP_126435929.1 signal peptidase I -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87461.78 Da        Isoelectric Point: 5.5469

>NTDB_id=996738 ELZ47_RS09995 WP_125330887.1 2010384..2012717(-) (mutS/mutS2) [Streptococcus sanguinis strain NCTC 10904]
MNTKILETLEFKKIKELFAPYLLTEQGQLELGLLLPTSKKETVASAFLEMTDMQQIFVQHPHFSLAATQDITALTKRLEL
ESDLNIEEFLALKRVLAVTQELRAFYEDLENVHLEKLDRLFDNLAVFPKLQGSLQAVNDGGFIESFASESLSRIRRKIQE
NENQVREILQEILKNKGEMLADQVVASRNGRNVLPVKNTYRNRISGVVHDISASGNTVYIEPRAVVNLNEEIASSRADER
YEIQRILQELSDLFRPHAAEIANNAWIIGHLDLVRAKVRFMQETGAVVPDLSEEQDIQLLSVRHPLIENAVANDLHFGPD
LTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD
SDSLVLLDELGAGTDPQEGAALAISILEDLRLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFMQGVPG
RSNAFEIARRLGLAEVIVGHAQEQTNTDSDVNRIIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEIIEAKAQLKKLAPETVDLSKNKVLKQAKKNRVPKVGDDILVTSY
GQRGTLVKQLKDGRWEAQVGLIKMTLEEQEFNLLKAEKEQQPKRKQVNVIKRANTAGPKARLDLRGKRYEEAMEELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVIFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=996738 ELZ47_RS09995 WP_125330887.1 2010384..2012717(-) (mutS/mutS2) [Streptococcus sanguinis strain NCTC 10904]
ATGAACACAAAAATTTTAGAAACCTTAGAATTTAAGAAGATTAAAGAACTGTTTGCTCCCTATCTTTTGACTGAGCAGGG
GCAGCTGGAGCTGGGCCTGCTCTTGCCAACCAGCAAGAAAGAGACGGTGGCCTCAGCTTTTCTGGAAATGACGGATATGC
AGCAGATTTTTGTGCAGCATCCGCACTTTAGTCTGGCAGCGACTCAGGATATTACTGCCTTGACCAAGCGCTTGGAGCTG
GAAAGCGACTTGAATATTGAGGAGTTTTTGGCCCTCAAACGAGTCTTGGCTGTGACTCAGGAGCTCAGGGCCTTTTATGA
GGACTTGGAAAATGTGCACTTGGAAAAGCTGGACCGTCTGTTTGATAATCTAGCTGTGTTCCCTAAGCTGCAAGGAAGTC
TGCAGGCTGTTAATGATGGAGGCTTTATTGAAAGCTTTGCCAGCGAAAGTTTGAGCCGCATCCGCCGAAAAATTCAAGAA
AATGAAAACCAGGTGCGGGAAATTCTGCAGGAGATTCTCAAAAACAAGGGAGAGATGCTGGCGGATCAGGTAGTGGCCAG
CCGGAATGGCCGCAATGTGCTGCCCGTGAAAAATACCTATCGCAACCGCATTTCAGGTGTGGTTCACGATATTTCAGCCA
GCGGCAATACCGTCTATATCGAGCCTAGAGCAGTTGTCAATCTCAACGAAGAAATTGCCAGCAGTCGGGCGGACGAGCGT
TATGAAATTCAGCGGATTTTGCAGGAATTATCGGACCTCTTCCGTCCCCATGCAGCTGAAATTGCCAACAATGCTTGGAT
TATCGGACATCTGGACCTGGTGCGTGCCAAGGTCCGCTTCATGCAGGAGACGGGAGCAGTGGTGCCAGACCTGTCGGAAG
AGCAGGATATCCAATTGCTTAGTGTCCGCCATCCCCTGATTGAAAATGCAGTGGCTAATGACTTGCATTTCGGGCCAGAT
TTGACAGAGATTGTCATTACTGGGCCAAATACCGGTGGTAAGACCATCATGCTGAAGACCTTGGGCTTGGCTCAGATCAT
GGCCCAGTCAGGTCTGCCGATTCTGGCGGACAAGGGCAGCCGCGTCGGGATTTTCAGTCAGATTTTTGCAGACATTGGTG
ATGAGCAGTCCATTGAGCAGAGCCTGTCGACTTTCTCCAGTCACATGACCAATATCGTCTCTATTTTAGAGCAGGTTGAT
AGCGATAGCTTGGTCCTGCTGGATGAGCTAGGAGCTGGGACTGATCCGCAGGAGGGGGCAGCTCTAGCTATTTCTATCTT
GGAAGATTTGCGTTTGAGACAGATTAAAACCATGGCGACGACCCACTATCCTGAGCTCAAAGCCTATGGGATTGAGACAG
ACTGGGTGGAAAATGCCAGCATGGAATTTGATACAGATAGTTTAAGGCCGACCTATCGCTTTATGCAGGGAGTGCCTGGC
CGCTCCAATGCCTTTGAAATCGCTCGGCGTTTGGGCTTGGCAGAAGTTATCGTTGGCCATGCCCAAGAGCAGACCAACAC
AGACAGCGATGTCAATCGGATCATTGAGCGCTTAGAGGAGCAGACACTGGAAAGCCGCAAGCGCTTGGATAATATCCGCG
AGGTGGAGCAGGAAAATCTCAAATTTAACCGAGCCCTCAAAAAGCTATATAATGAGTTTAACCGAGAAAAGGAAACCGAG
CTCAATAAGGCGCGCTTGGAAGCCCAGGAAATCGTTGATTTGGCTCTGTCAGAGAGTGAGAGCATTCTCAAAAATCTCCA
TGATAAGTCTAGTCTCAAACCGCATGAGATTATCGAAGCCAAGGCTCAGCTTAAAAAGTTGGCACCAGAAACAGTTGATT
TATCAAAGAATAAGGTACTCAAGCAGGCCAAGAAAAATCGGGTGCCTAAGGTGGGAGATGATATCCTAGTCACCAGCTAT
GGTCAGCGGGGAACCTTGGTCAAGCAGCTCAAAGACGGTCGCTGGGAAGCTCAAGTCGGTCTTATCAAGATGACTCTAGA
AGAGCAGGAATTTAATCTTCTCAAGGCTGAAAAGGAGCAGCAACCTAAGCGCAAGCAGGTTAATGTGATCAAGCGGGCTA
ATACTGCTGGACCCAAAGCCAGGCTGGACCTGCGCGGCAAACGCTACGAAGAGGCCATGGAAGAGCTCGATGCCTTTATC
GATCAGGCCCTCCTCAATAACATGGCTCAGGTGGATATTATCCACGGTATTGGGACCGGAGTCATCCGTGAAGGGGTGAC
CAAATATCTCCGCCGCAACAAGCACGTTAAGTCCTTCGGCTATGCTCCGCAAAATGCTGGCGGCAGCGGTGCGACGATTG
TGATATTTAAGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-668)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

38.91

100

0.395

Multiple sequence alignment