Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AAHT64_RS18380 Genome accession   NZ_CP155054
Coordinates   3547794..3548744 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis strain R38     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3542794..3553744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT64_RS18360 (AAHT64_18360) ycnB 3543662..3545080 (+) 1419 WP_003234482.1 MDR family MFS transporter -
  AAHT64_RS18365 (AAHT64_18365) yclQ 3545127..3546080 (-) 954 WP_003234484.1 petrobactin ABC transporter substrate-binding protein YclQ -
  AAHT64_RS18370 (AAHT64_18370) yclP 3546102..3546860 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  AAHT64_RS18375 (AAHT64_18375) yclO 3546854..3547801 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  AAHT64_RS18380 (AAHT64_18380) ceuB 3547794..3548744 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  AAHT64_RS18385 (AAHT64_18385) thrD 3549129..3550493 (+) 1365 WP_003234493.1 aspartate kinase -
  AAHT64_RS18390 (AAHT64_18390) yczN 3550647..3550760 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  AAHT64_RS18395 (AAHT64_18395) yczM 3550842..3550931 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  AAHT64_RS18400 (AAHT64_18400) phrC 3551031..3551153 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  AAHT64_RS18405 (AAHT64_18405) rapC 3551137..3552285 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=995883 AAHT64_RS18380 WP_003234491.1 3547794..3548744(-) (ceuB) [Bacillus subtilis subsp. subtilis strain R38]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=995883 AAHT64_RS18380 WP_003234491.1 3547794..3548744(-) (ceuB) [Bacillus subtilis subsp. subtilis strain R38]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment