Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AAYR29_RS23150 Genome accession   NZ_CP154918
Coordinates   4354676..4356988 (+) Length   770 a.a.
NCBI ID   WP_213418792.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2231     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 4349676..4361988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR29_RS23125 (AAYR29_23125) pdeH 4351213..4352442 (+) 1230 WP_345805927.1 cyclic di-GMP phosphodiesterase -
  AAYR29_RS23130 (AAYR29_23130) - 4352418..4352786 (-) 369 WP_017695529.1 hypothetical protein -
  AAYR29_RS23135 (AAYR29_23135) degQ 4353249..4353389 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AAYR29_RS23140 (AAYR29_23140) - 4353574..4354437 (+) 864 WP_345805928.1 polyprenyl synthetase family protein -
  AAYR29_RS23145 (AAYR29_23145) comX 4354439..4354660 (+) 222 WP_014480704.1 competence pheromone ComX -
  AAYR29_RS23150 (AAYR29_23150) comP 4354676..4356988 (+) 2313 WP_213418792.1 histidine kinase Regulator
  AAYR29_RS23155 (AAYR29_23155) comA 4357069..4357713 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  AAYR29_RS23160 (AAYR29_23160) yuxO 4357732..4358112 (+) 381 WP_014477831.1 hotdog fold thioesterase -
  AAYR29_RS23165 (AAYR29_23165) mnhG 4358151..4358525 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  AAYR29_RS23170 (AAYR29_23170) mrpF 4358509..4358793 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AAYR29_RS23175 (AAYR29_23175) mrpE 4358793..4359269 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  AAYR29_RS23180 (AAYR29_23180) mrpD 4359275..4360756 (-) 1482 WP_041850587.1 Na+/H+ antiporter subunit D -
  AAYR29_RS23185 (AAYR29_23185) mrpC 4360749..4361090 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  AAYR29_RS23190 (AAYR29_23190) mrpB 4361090..4361521 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89598.82 Da        Isoelectric Point: 8.3021

>NTDB_id=995418 AAYR29_RS23150 WP_213418792.1 4354676..4356988(+) (comP) [Bacillus subtilis strain FUA2231]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFLEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=995418 AAYR29_RS23150 WP_213418792.1 4354676..4356988(+) (comP) [Bacillus subtilis strain FUA2231]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAAAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTAGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCTACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGCGGGGCAAGAAGAGGTGAAGAGATAAGCACTTACCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCACTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
TTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTGGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTGCTTATGTTTGCCGTTTTTTACTTTAAAGAGATTATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATTTAACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAAAGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAAGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TGCAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGAT
GGCGTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.177

99.87

0.561


Multiple sequence alignment