Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | AAYR29_RS03740 | Genome accession | NZ_CP154918 |
| Coordinates | 643032..643367 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain FUA2231 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 638032..648367
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAYR29_RS03690 (AAYR29_03690) | comGC | 638051..638347 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AAYR29_RS03695 (AAYR29_03695) | comGD | 638337..638768 (+) | 432 | WP_024573390.1 | comG operon protein ComGD | Machinery gene |
| AAYR29_RS03700 (AAYR29_03700) | comGE | 638752..639099 (+) | 348 | WP_345806076.1 | ComG operon protein 5 | Machinery gene |
| AAYR29_RS03705 (AAYR29_03705) | comGF | 639125..639508 (+) | 384 | WP_345806077.1 | ComG operon protein ComGF | Machinery gene |
| AAYR29_RS03710 (AAYR29_03710) | comGG | 639509..639883 (+) | 375 | WP_345806078.1 | ComG operon protein ComGG | Machinery gene |
| AAYR29_RS03715 (AAYR29_03715) | spoIIT | 639954..640133 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| AAYR29_RS03720 (AAYR29_03720) | yqzG | 640175..640501 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AAYR29_RS03725 (AAYR29_03725) | tapA | 640773..641534 (+) | 762 | WP_345806079.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AAYR29_RS03730 (AAYR29_03730) | sipW | 641518..642090 (+) | 573 | WP_072692741.1 | signal peptidase I | - |
| AAYR29_RS03735 (AAYR29_03735) | tasA | 642154..642939 (+) | 786 | WP_345806080.1 | biofilm matrix protein TasA | - |
| AAYR29_RS03740 (AAYR29_03740) | sinR | 643032..643367 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| AAYR29_RS03745 (AAYR29_03745) | sinI | 643401..643574 (-) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| AAYR29_RS03750 (AAYR29_03750) | yqhG | 643757..644551 (-) | 795 | WP_003230200.1 | YqhG family protein | - |
| AAYR29_RS03755 (AAYR29_03755) | yqhH | 644572..646245 (-) | 1674 | WP_003230203.1 | SNF2-related protein | - |
| AAYR29_RS03760 (AAYR29_03760) | gcvT | 646687..647775 (+) | 1089 | WP_345806081.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=995361 AAYR29_RS03740 WP_003226345.1 643032..643367(-) (sinR) [Bacillus subtilis strain FUA2231]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=995361 AAYR29_RS03740 WP_003226345.1 643032..643367(-) (sinR) [Bacillus subtilis strain FUA2231]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCGGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCGGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |