Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   AAYR29_RS03690 Genome accession   NZ_CP154918
Coordinates   638051..638347 (+) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain FUA2231     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 633051..643347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR29_RS03665 (AAYR29_03665) yqhB 633108..634436 (-) 1329 WP_003230150.1 hemolysin family protein -
  AAYR29_RS03670 (AAYR29_03670) corA 634579..635532 (+) 954 WP_015483432.1 magnesium transporter CorA -
  AAYR29_RS03675 (AAYR29_03675) - 635534..635731 (+) 198 WP_129134319.1 hypothetical protein -
  AAYR29_RS03680 (AAYR29_03680) comGA 635943..637013 (+) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  AAYR29_RS03685 (AAYR29_03685) comGB 637000..638037 (+) 1038 WP_345806075.1 comG operon protein ComGB Machinery gene
  AAYR29_RS03690 (AAYR29_03690) comGC 638051..638347 (+) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  AAYR29_RS03695 (AAYR29_03695) comGD 638337..638768 (+) 432 WP_024573390.1 comG operon protein ComGD Machinery gene
  AAYR29_RS03700 (AAYR29_03700) comGE 638752..639099 (+) 348 WP_345806076.1 ComG operon protein 5 Machinery gene
  AAYR29_RS03705 (AAYR29_03705) comGF 639125..639508 (+) 384 WP_345806077.1 ComG operon protein ComGF Machinery gene
  AAYR29_RS03710 (AAYR29_03710) comGG 639509..639883 (+) 375 WP_345806078.1 ComG operon protein ComGG Machinery gene
  AAYR29_RS03715 (AAYR29_03715) spoIIT 639954..640133 (+) 180 WP_003230176.1 YqzE family protein -
  AAYR29_RS03720 (AAYR29_03720) yqzG 640175..640501 (-) 327 WP_003246051.1 YqzG/YhdC family protein -
  AAYR29_RS03725 (AAYR29_03725) tapA 640773..641534 (+) 762 WP_345806079.1 amyloid fiber anchoring/assembly protein TapA -
  AAYR29_RS03730 (AAYR29_03730) sipW 641518..642090 (+) 573 WP_072692741.1 signal peptidase I -
  AAYR29_RS03735 (AAYR29_03735) tasA 642154..642939 (+) 786 WP_345806080.1 biofilm matrix protein TasA -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=995356 AAYR29_RS03690 WP_003230162.1 638051..638347(+) (comGC) [Bacillus subtilis strain FUA2231]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=995356 AAYR29_RS03690 WP_003230162.1 638051..638347(+) (comGC) [Bacillus subtilis strain FUA2231]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378

Multiple sequence alignment