Detailed information NTG0995327

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AAVC46_RS11675
• Genome accession: NZ_CP154913
• Coordinates: 2222894..2224069 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain FUA2119
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2217894..2229069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVC46_RS11645 (AAVC46_11645)	-	2218061..2218480 (-)	420	WP_034660147.1	TIGR03826 family flagellar region protein	-
AAVC46_RS11650 (AAVC46_11650)	comFC	2218537..2219223 (-)	687	WP_340973906.1	ComF family protein	Machinery gene
AAVC46_RS11655 (AAVC46_11655)	-	2219220..2219513 (-)	294	WP_060597398.1	competence protein ComFB	-
AAVC46_RS11660 (AAVC46_11660)	comFA	2219580..2220959 (-)	1380	WP_307500336.1	DEAD/DEAH box helicase	Machinery gene
AAVC46_RS11665 (AAVC46_11665)	-	2221080..2221922 (-)	843	WP_034660152.1	DegV family protein	-
AAVC46_RS11670 (AAVC46_11670)	degU	2222140..2222829 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AAVC46_RS11675 (AAVC46_11675)	degS	2222894..2224069 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AAVC46_RS11680 (AAVC46_11680)	-	2224291..2224959 (+)	669	WP_012011434.1	YigZ family protein	-
AAVC46_RS11685 (AAVC46_11685)	-	2224944..2226035 (+)	1092	WP_034660153.1	LCP family protein	-
AAVC46_RS11690 (AAVC46_11690)	-	2226071..2227138 (-)	1068	WP_034660156.1	MraY family glycosyltransferase	-
AAVC46_RS11695 (AAVC46_11695)	-	2227273..2228472 (-)	1200	WP_340973908.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=995327 AAVC46_RS11675 WP_003213166.1 2222894..2224069(-) (degS) [Bacillus pumilus strain FUA2119]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=995327 AAVC46_RS11675 WP_003213166.1 2222894..2224069(-) (degS) [Bacillus pumilus strain FUA2119]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTCGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAATCTGCAAGTGGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTTAGAGAAAGAAGAGACGATCTGGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTGTCCCGGGA
AATTCATGACGGTCCGGCCCAGATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATTACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841