Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AAVC46_RS10060 Genome accession   NZ_CP154913
Coordinates   1902207..1904519 (-) Length   770 a.a.
NCBI ID   WP_340973638.1    Uniprot ID   -
Organism   Bacillus pumilus strain FUA2119     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1897207..1909519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVC46_RS10020 (AAVC46_10020) - 1897597..1898028 (+) 432 WP_034317176.1 Na(+)/H(+) antiporter subunit B -
  AAVC46_RS10025 (AAVC46_10025) - 1898028..1898369 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  AAVC46_RS10030 (AAVC46_10030) - 1898362..1899840 (+) 1479 WP_034659818.1 Na+/H+ antiporter subunit D -
  AAVC46_RS10035 (AAVC46_10035) - 1899847..1900326 (+) 480 WP_034659819.1 Na+/H+ antiporter subunit E -
  AAVC46_RS10040 (AAVC46_10040) - 1900326..1900607 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  AAVC46_RS10045 (AAVC46_10045) mnhG 1900591..1900965 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  AAVC46_RS10050 (AAVC46_10050) - 1901072..1901461 (-) 390 WP_034659822.1 hotdog fold thioesterase -
  AAVC46_RS10055 (AAVC46_10055) comA 1901485..1902126 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  AAVC46_RS10060 (AAVC46_10060) comP 1902207..1904519 (-) 2313 WP_340973638.1 ATP-binding protein Regulator
  AAVC46_RS10065 (AAVC46_10065) comX 1904573..1904743 (-) 171 WP_080869541.1 competence pheromone ComX -
  AAVC46_RS10070 (AAVC46_10070) - 1904740..1905654 (-) 915 WP_340973639.1 polyprenyl synthetase family protein -
  AAVC46_RS10075 (AAVC46_10075) degQ 1905806..1905946 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  AAVC46_RS10080 (AAVC46_10080) - 1906452..1906805 (+) 354 WP_340973640.1 inner spore coat protein -
  AAVC46_RS10085 (AAVC46_10085) - 1906839..1908065 (-) 1227 WP_334750679.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89506.01 Da        Isoelectric Point: 7.1203

>NTDB_id=995319 AAVC46_RS10060 WP_340973638.1 1902207..1904519(-) (comP) [Bacillus pumilus strain FUA2119]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGAHVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANKKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYLIPLVLYSICLFCIFFIIRINKETQRKSAFLLVLFLLTICIGY
LSAGTSGIGERFSHYVIVFCLSSVFIFYIHFIYQYFKEFNLHITNQKTIRLLYSLPVINLLIELAVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYALMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSNLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAMSKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDD
GVGFDSSHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=995319 AAVC46_RS10060 WP_340973638.1 1902207..1904519(-) (comP) [Bacillus pumilus strain FUA2119]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACATGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAAAAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTTAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATTTAATTCCTCTCGTCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTAGAATTAACAAAGAGACCCAACGGAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGGTAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAAAGATTTAGCCATTATGTGATCGTATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAGTATTTTAAAGAGTTTAACTTGCATATAACAAATCAAAAAACAATTCGCCTTTTATATA
GTCTTCCAGTAATTAATCTATTGATAGAGCTAGCAGTTCCAATAGATTCAGCGATAGCAAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTCTGTCCATTTATATTTTTATTTGCAATACCATATG
TTTTGTTTCGTATTTATGTGGTAGATCCCTTTTTCTTGACTTCTTTTGTCTTGCTTATTCCTTTTTCTCTAGTGTACCAA
TTCATGACGAACAAACTTTACAATATGGATTTTTTGATTAGCAGACTGAGGTACTATGGCTTTCTAGCCATCACACCGAC
CATTTTTGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACCT
ACGCGCTCATGCTGGCTGTTTTCTATTTCAAAGAAATTCTAGATTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCAT
AATTACCAGGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTTAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGACAAATTGAAGAGATTG
ATGAATCTTCAGGTGATAGCAATCTATGGAAAGAGTATGTGGATCAATTTCAGGATATTTTAGGGGAAGTCGGGAAAATC
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTATGATTTGCTGTTTATCCAATTT
ACAGACACCTAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCTTTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAATCCTGCTTGGCTGAAAAAAGTC
ATGTTTGCGATGGAAGAAAAACAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGCT
GAAAAGACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTA
GGTTTAGTCAAGGCGATGTCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCGTTTCATATCCGGCTGAATACAACACG
CTTTGATAAAGAACTGGACATTGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAGCTGTTATCCAATGCCC
TGAAGCACTCCCAAGCCACTCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGAT
GGAGTCGGTTTTGATTCAAGCCATCTTGATCAGCACACCATGAGCATGGGCCTCTCGGGAATCAGAGAACGAGTCAAGGC
ATTAAATGGGAAGCTTCACATTCACACAGCCCCAGAAAAAGGACTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.846

100

0.495


Multiple sequence alignment