Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EJ102_RS02195 Genome accession   NZ_LR130530
Coordinates   453092..453499 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa isolate paerg003     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 448092..458499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJ102_RS02165 (BANRA_00417) - 448140..449144 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  EJ102_RS02170 (BANRA_00418) pyrR 449168..449680 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EJ102_RS02175 (BANRA_00419) ruvX 449792..450226 (-) 435 WP_003121753.1 Holliday junction resolvase RuvX -
  EJ102_RS02180 (BANRA_00420) - 450226..450795 (-) 570 WP_070870543.1 YqgE/AlgH family protein -
  EJ102_RS02185 (BANRA_00421) - 450844..451737 (-) 894 WP_003160914.1 energy transducer TonB -
  EJ102_RS02190 (BANRA_00422) gshB 451884..452837 (-) 954 WP_003100943.1 glutathione synthase -
  EJ102_RS02195 (BANRA_00423) pilG 453092..453499 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  EJ102_RS02200 (BANRA_00424) pilH 453546..453911 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  EJ102_RS02205 (BANRA_00425) - 453962..454498 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  EJ102_RS02210 (BANRA_00426) pilJ 454583..456631 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  EJ102_RS02215 (BANRA_00427) pilK 456692..457567 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=995216 EJ102_RS02195 WP_003084583.1 453092..453499(+) (pilG) [Pseudomonas aeruginosa isolate paerg003]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=995216 EJ102_RS02195 WP_003084583.1 453092..453499(+) (pilG) [Pseudomonas aeruginosa isolate paerg003]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385