Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | EJ102_RS02200 | Genome accession | NZ_LR130530 |
| Coordinates | 453546..453911 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa isolate paerg003 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 448546..458911
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJ102_RS02170 (BANRA_00418) | pyrR | 449168..449680 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| EJ102_RS02175 (BANRA_00419) | ruvX | 449792..450226 (-) | 435 | WP_003121753.1 | Holliday junction resolvase RuvX | - |
| EJ102_RS02180 (BANRA_00420) | - | 450226..450795 (-) | 570 | WP_070870543.1 | YqgE/AlgH family protein | - |
| EJ102_RS02185 (BANRA_00421) | - | 450844..451737 (-) | 894 | WP_003160914.1 | energy transducer TonB | - |
| EJ102_RS02190 (BANRA_00422) | gshB | 451884..452837 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| EJ102_RS02195 (BANRA_00423) | pilG | 453092..453499 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| EJ102_RS02200 (BANRA_00424) | pilH | 453546..453911 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| EJ102_RS02205 (BANRA_00425) | - | 453962..454498 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| EJ102_RS02210 (BANRA_00426) | pilJ | 454583..456631 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| EJ102_RS02215 (BANRA_00427) | pilK | 456692..457567 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=995217 EJ102_RS02200 WP_003084587.1 453546..453911(+) (pilH) [Pseudomonas aeruginosa isolate paerg003]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=995217 EJ102_RS02200 WP_003084587.1 453546..453911(+) (pilH) [Pseudomonas aeruginosa isolate paerg003]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |