Detailed information NTG0995212

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AAYR28_RS16305
• Genome accession: NZ_CP154909
• Coordinates: 3159251..3160426 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain FUA2117
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3154251..3165426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR28_RS16275 (AAYR28_16275)	-	3154420..3154839 (-)	420	WP_120207796.1	TIGR03826 family flagellar region protein	-
AAYR28_RS16280 (AAYR28_16280)	comFC	3154896..3155552 (-)	657	WP_251232415.1	ComF family protein	Machinery gene
AAYR28_RS16285 (AAYR28_16285)	-	3155579..3155872 (-)	294	WP_024423623.1	competence protein ComFB	-
AAYR28_RS16290 (AAYR28_16290)	comFA	3155921..3157318 (-)	1398	WP_142925562.1	DEAD/DEAH box helicase	Machinery gene
AAYR28_RS16295 (AAYR28_16295)	-	3157439..3158281 (-)	843	WP_024423625.1	DegV family protein	-
AAYR28_RS16300 (AAYR28_16300)	degU	3158497..3159186 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AAYR28_RS16305 (AAYR28_16305)	degS	3159251..3160426 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AAYR28_RS16310 (AAYR28_16310)	-	3160647..3161315 (+)	669	WP_012011434.1	YigZ family protein	-
AAYR28_RS16315 (AAYR28_16315)	-	3161300..3162391 (+)	1092	WP_034281103.1	LCP family protein	-
AAYR28_RS16320 (AAYR28_16320)	-	3162427..3163494 (-)	1068	WP_024423627.1	MraY family glycosyltransferase	-
AAYR28_RS16325 (AAYR28_16325)	-	3163629..3164825 (-)	1197	WP_034281445.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=995212 AAYR28_RS16305 WP_003213166.1 3159251..3160426(-) (degS) [Bacillus safensis strain FUA2117]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=995212 AAYR28_RS16305 WP_003213166.1 3159251..3160426(-) (degS) [Bacillus safensis strain FUA2117]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCCAATGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGATGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841