Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AAVC94_RS14870 Genome accession   NZ_CP154906
Coordinates   2867896..2870181 (-) Length   761 a.a.
NCBI ID   WP_253622277.1    Uniprot ID   -
Organism   Bacillus pumilus strain FUA2115     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2862896..2875181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVC94_RS14830 (AAVC94_14830) - 2863308..2863739 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  AAVC94_RS14835 (AAVC94_14835) - 2863739..2864079 (+) 341 Protein_2851 Na(+)/H(+) antiporter subunit C -
  AAVC94_RS14840 (AAVC94_14840) - 2864072..2865550 (+) 1479 WP_034620106.1 Na+/H+ antiporter subunit D -
  AAVC94_RS14845 (AAVC94_14845) - 2865557..2866036 (+) 480 WP_044140819.1 Na+/H+ antiporter subunit E -
  AAVC94_RS14850 (AAVC94_14850) - 2866036..2866317 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  AAVC94_RS14855 (AAVC94_14855) mnhG 2866301..2866675 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  AAVC94_RS14860 (AAVC94_14860) - 2866761..2867150 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  AAVC94_RS14865 (AAVC94_14865) comA 2867174..2867815 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  AAVC94_RS14870 (AAVC94_14870) comP 2867896..2870181 (-) 2286 WP_253622277.1 ATP-binding protein Regulator
  AAVC94_RS14875 (AAVC94_14875) comX 2870188..2870367 (-) 180 WP_137054465.1 competence pheromone ComX -
  AAVC94_RS14880 (AAVC94_14880) - 2870345..2871268 (-) 924 WP_338423204.1 polyprenyl synthetase family protein -
  AAVC94_RS14885 (AAVC94_14885) degQ 2871420..2871560 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  AAVC94_RS14890 (AAVC94_14890) - 2872066..2872419 (+) 354 WP_212045491.1 inner spore coat protein -
  AAVC94_RS14895 (AAVC94_14895) - 2872450..2873676 (-) 1227 WP_212045764.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 761 a.a.        Molecular weight: 87872.15 Da        Isoelectric Point: 7.2087

>NTDB_id=995083 AAVC94_RS14870 WP_253622277.1 2867896..2870181(-) (comP) [Bacillus pumilus strain FUA2115]
MQKFYSKLTVILIILSFIYVIYISYINVFNIFVGAVVSVNSDGQLEIEDVVDFTDSYYAGVRKGDIILEVNGNKEPTEEV
RRGYLANVKSLVVDRHGDEIVIENVRLLSQENLFIYLIPIIFYSICLFCIFMILKINKSRKKESAYILALFLLAVAVAYV
SSGGSGKGEYISGFIVISTMTCVPPLYMHFMYQYLKELGTKIISVRVLLSLYAVPFINLVLEIYFKNMVLAAFNLLSFFA
LAFITIIITFRSAKRWKGTEIGNVLSAFGLVLITSFSPFMLFFIIPYFFHKYFISPYILASFALLIPFFLVYQFMSNKLY
NVDFFMGRIKYYCLLAITPTIVVVIIFDFIQKPSANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSELWKKYVDQFQELLGEVGKIVGLDKGF
MMKIGERGGHSFVICCLSNLRIPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDDGVGFDASHL
DQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2286 bp        

>NTDB_id=995083 AAVC94_RS14870 WP_253622277.1 2867896..2870181(-) (comP) [Bacillus pumilus strain FUA2115]
ATGCAAAAATTTTACTCGAAATTAACTGTTATTTTAATCATCCTTAGCTTCATTTATGTGATTTATATTTCTTACATCAA
TGTGTTTAATATCTTTGTAGGAGCAGTCGTTTCGGTGAATAGTGACGGACAACTTGAAATAGAGGATGTTGTTGATTTTA
CAGACAGTTATTATGCTGGTGTTAGAAAAGGCGATATCATCCTTGAAGTGAACGGTAATAAAGAACCAACCGAAGAAGTA
AGAAGAGGTTATTTAGCAAACGTCAAAAGTTTAGTTGTTGATAGACATGGTGATGAAATTGTCATAGAGAATGTGAGGTT
ATTAAGTCAAGAAAATCTATTTATCTACTTAATACCGATCATTTTTTATTCAATCTGTCTATTTTGTATATTTATGATTT
TAAAAATCAACAAATCTAGGAAAAAAGAGTCTGCATATATTCTTGCCCTTTTTTTATTGGCTGTTGCTGTAGCATATGTC
AGTTCTGGTGGTTCTGGTAAAGGTGAGTATATTAGTGGTTTTATCGTCATTTCTACGATGACTTGTGTACCTCCTTTATA
TATGCACTTTATGTATCAGTATTTGAAGGAATTGGGTACGAAAATTATTAGTGTACGTGTGCTTCTTTCTTTGTATGCAG
TTCCATTTATAAATCTTGTTTTAGAAATTTATTTTAAAAATATGGTTTTAGCTGCTTTCAACTTACTTTCGTTTTTTGCA
CTTGCATTTATTACGATTATTATCACATTCAGATCAGCTAAAAGGTGGAAAGGCACGGAAATTGGTAATGTCCTTAGTGC
ATTTGGACTTGTCTTAATCACGTCATTCAGTCCTTTTATGCTGTTCTTTATCATTCCATATTTTTTTCATAAGTATTTTA
TTTCGCCTTATATTCTTGCTTCGTTTGCATTATTAATTCCGTTTTTCTTAGTCTATCAATTTATGTCAAATAAATTGTAT
AATGTGGATTTCTTTATGGGGAGGATCAAATATTACTGCCTTTTAGCCATTACACCAACTATAGTAGTGGTTATCATATT
TGATTTCATTCAAAAACCTAGTGCTAACTTTTATACAGTGAAGTTTACGATTATCACATATATTCTTATGTTGACAGTCT
TTTACTTTAAAGAAATCATCGATTTTCGCTTTCGCCTGAAGCGTTTTTCAGAGAAGCATAATTATCAGGACAGTGTGTTT
AAATTTACGCAGCTCATTCGCGAGGCATCATCACTTCACCAAGTGTTATATCATTTGAAATACACCATTTTAGAAGTGCT
AGTTGTTAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGACAAATAGAAGAGATTGATGAATCTTCAGGTGATAGTG
AGCTATGGAAAAAGTATGTAGACCAATTTCAAGAATTATTAGGTGAAGTTGGAAAAATCGTCGGGCTTGATAAAGGGTTC
ATGATGAAAATTGGCGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTTACGGATACCAAAATTGACGCG
TGATGAGATTTCTTGGCTGAAAACATTGGCATTTTATACAAGTGTCAGTTTAGAAAATGTCGTCAAGATTGAAGAATTGA
TGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAATCCAGCTTGGCTGAAAAAAGTCATGTTTGCGATGGAAGAAAAG
CAGCGATCAGATTTAGCAAGAGATCTTCATGATTCTGTGCTGCAGGATTTGATATCACTGAAAAGGCAGTCAGAGATGTT
TTTAACGAATTTCCAAAATGACCAATGCCCGACTTCTATTGAACAATCGCTTATCTCATGGAATGAGCAAATGTCTAAGG
TGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTACTGTATGATTTAGGTCTAGTGAAGGCGATATCG
AAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCATATCCGGCTGAATACGACACGTTTTGATAAAGAGCTGGACAT
TGATTCCCAGCTGAATATTTACCGGATTGTTCAAGAACTGTTATCCAATGCCTTGAAACATTCTCAAGCCAGCCAAGTGC
TCGTAATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGATGGAGTAGGCTTTGACGCAAGCCATCTT
GATCAGCACACCATGAGCATGGGCCTCTCTGGGATCAGAGAACGAGTCAAGGCGTTAAATGGGAAGCTTCACATTCATAC
CGCACCTGAAAAAGGGCTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.969

100

0.499


Multiple sequence alignment