Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAIA72_RS13180 Genome accession   NZ_CP154858
Coordinates   2731733..2732128 (-) Length   131 a.a.
NCBI ID   WP_369600768.1    Uniprot ID   -
Organism   Hahella sp. SMD15-11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2726733..2737128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAIA72_RS13160 (AAIA72_13125) - 2727692..2728573 (-) 882 WP_369600764.1 protein-glutamate O-methyltransferase CheR -
  AAIA72_RS13165 (AAIA72_13130) - 2728605..2730683 (-) 2079 WP_369600765.1 methyl-accepting chemotaxis protein -
  AAIA72_RS13170 (AAIA72_13135) - 2730741..2731301 (-) 561 WP_369600766.1 chemotaxis protein CheW -
  AAIA72_RS13175 (AAIA72_13140) pilH 2731308..2731670 (-) 363 WP_369600767.1 twitching motility response regulator PilH -
  AAIA72_RS13180 (AAIA72_13145) pilG 2731733..2732128 (-) 396 WP_369600768.1 twitching motility response regulator PilG Regulator
  AAIA72_RS13185 (AAIA72_13150) gshB 2732441..2733387 (+) 947 Protein_2583 glutathione synthase -
  AAIA72_RS13190 (AAIA72_13155) - 2733388..2734266 (+) 879 WP_369600769.1 energy transducer TonB -
  AAIA72_RS13195 (AAIA72_13160) - 2734281..2734829 (+) 549 WP_369600770.1 YqgE/AlgH family protein -
  AAIA72_RS13200 (AAIA72_13165) ruvX 2734822..2735259 (+) 438 WP_369600771.1 Holliday junction resolvase RuvX -
  AAIA72_RS13205 (AAIA72_13170) pyrR 2735256..2735762 (+) 507 WP_369600772.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AAIA72_RS13210 (AAIA72_13175) - 2735780..2736775 (+) 996 WP_369603008.1 aspartate carbamoyltransferase catalytic subunit -
  AAIA72_RS13215 (AAIA72_13180) - 2736777..2737097 (+) 321 WP_369600773.1 hypothetical protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14580.85 Da        Isoelectric Point: 7.8535

>NTDB_id=994136 AAIA72_RS13180 WP_369600768.1 2731733..2732128(-) (pilG) [Hahella sp. SMD15-11]
MEDNFENLKVMVIDDSKTIRRTAETLLKKVGCTVITATDGFDALAKIADSHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
NTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLGTIREHAKRKEGA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=994136 AAIA72_RS13180 WP_369600768.1 2731733..2732128(-) (pilG) [Hahella sp. SMD15-11]
ATGGAAGATAACTTCGAAAACCTCAAGGTCATGGTCATTGACGACAGCAAGACGATTCGTCGGACCGCCGAAACACTGCT
CAAGAAAGTGGGCTGTACGGTCATTACTGCGACGGATGGTTTTGACGCGCTGGCCAAGATTGCGGACTCACACCCGGACA
TCATCTTTGTGGACATCATGATGCCACGGCTGGACGGGTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCTTTCCGC
AACACGCCGGTGATCATGTTGTCCAGCAAGGACGGCCTGTTCGACAAGGCCAAGGGACGGATTGTCGGCTCTGACCAGTA
TCTGACCAAACCATTCAGCAAGGACGAGCTGCTGGGCACCATCAGGGAACACGCCAAACGGAAGGAGGGCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

79.839

94.656

0.756
  vicR Streptococcus mutans UA159

42.975

92.366

0.397
  pilH Synechocystis sp. PCC 6803

42.105

87.023

0.366

Multiple sequence alignment