Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   H702_RS02875 Genome accession   NZ_AUZH01000012
Coordinates   116764..118779 (+) Length   671 a.a.
NCBI ID   WP_039696341.1    Uniprot ID   A0A091CBD1
Organism   Streptococcus equinus JB1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 111764..123779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H702_RS02855 (H702_02955) - 112933..113964 (+) 1032 WP_039696337.1 3-deoxy-7-phosphoheptulonate synthase -
  H702_RS02860 (H702_02960) - 113968..115023 (+) 1056 WP_039696338.1 3-deoxy-7-phosphoheptulonate synthase -
  H702_RS02865 (H702_02965) acpS 115145..115504 (+) 360 WP_039696339.1 holo-ACP synthase -
  H702_RS02870 (H702_02970) alr 115572..116678 (+) 1107 WP_039696340.1 alanine racemase -
  H702_RS02875 (H702_02975) recG/mmsA 116764..118779 (+) 2016 WP_039696341.1 ATP-dependent DNA helicase RecG Machinery gene
  H702_RS02880 (H702_02980) - 119270..119737 (+) 468 WP_039696342.1 hypothetical protein -
  H702_RS02885 (H702_02985) - 119791..120294 (+) 504 WP_234787332.1 DUF2975 domain-containing protein -
  H702_RS02890 (H702_02990) - 120311..120526 (+) 216 WP_024343592.1 hypothetical protein -
  H702_RS02895 (H702_02995) - 120538..120747 (+) 210 WP_021143062.1 helix-turn-helix domain-containing protein -
  H702_RS02900 (H702_03000) - 120950..121453 (+) 504 WP_039696343.1 DUF2975 domain-containing protein -
  H702_RS02905 (H702_03005) - 121510..122472 (-) 963 WP_024343594.1 asparaginase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 74773.08 Da        Isoelectric Point: 6.4540

>NTDB_id=99411 H702_RS02875 WP_039696341.1 116764..118779(+) (recG/mmsA) [Streptococcus equinus JB1]
MNLQSSIEELKGLGPKSAEKFHKLDIYTIEDLLLYYPFRYEDFKSKSVLDLVDGEKAVIVGTVVTPANVQYYGYKRNRLS
FKIKQGEAVIVVSFFNQPYLADKVELGSDVAIFGKWDALKSAVTGMKILAQVEDDMQPVYRVAQGISQNALIKAIKAAFA
LGAQNWLPENLPQVFLDKYRLLGRAKATEAMHFPKDLAEYKQALRRIKFEELFYFQMNLQALKADNKSEANGLMIAYDEQ
KVADKIASLPFDLTGGQKRSLSDILSDMRSGGHMNRLLQGDVGSGKTVVASLAMYAAYTAGFQSALMVPTEILAEQHFES
LIQLFPDLSIAILTSGMKAANKKAALAVIADGSVDMIVGTHALIQDAVSYHRLGLVITDEQHRFGVNQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSIIDELPAGRKPIITRWVKHEQLDVVLDWVKKELQKGAQAYVISPLIEESESLDLKN
AIALHEDLSEYFAGCANVALMHGRMKNDEKEAIMQDFKAQKSQVLVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGQKQSYAILVANPKTQTGKERMKIMTETTDGFVLAEADLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEARR
VASQIVSEKDWKSNPQWQVISQNLKDKGNFD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=99411 H702_RS02875 WP_039696341.1 116764..118779(+) (recG/mmsA) [Streptococcus equinus JB1]
ATGAATTTACAATCATCAATTGAGGAATTGAAAGGCTTAGGTCCTAAGTCGGCAGAAAAATTCCATAAATTAGACATTTA
TACGATTGAGGATTTGCTACTTTATTATCCTTTTCGTTACGAAGATTTTAAGAGCAAGAGTGTTTTAGATTTAGTTGACG
GGGAAAAAGCTGTTATTGTTGGAACAGTAGTAACGCCAGCAAATGTTCAGTATTATGGTTATAAGCGTAATCGACTGTCT
TTTAAAATCAAGCAAGGCGAAGCCGTTATCGTGGTATCTTTTTTCAATCAGCCTTATTTGGCAGATAAAGTTGAGCTTGG
CAGTGATGTGGCGATTTTTGGAAAATGGGACGCTCTAAAATCAGCAGTGACTGGTATGAAGATTTTAGCGCAGGTTGAAG
ATGATATGCAGCCTGTTTACCGTGTGGCGCAGGGCATTTCGCAAAATGCTTTGATTAAAGCCATAAAAGCCGCTTTTGCT
CTTGGTGCACAAAATTGGTTGCCTGAGAATCTACCCCAAGTTTTCTTGGACAAATACCGTTTATTAGGTCGTGCAAAAGC
AACAGAAGCCATGCATTTTCCAAAGGATTTAGCAGAATACAAACAAGCCCTTCGTCGTATAAAGTTTGAAGAACTTTTTT
ATTTTCAAATGAATCTGCAAGCTTTGAAGGCAGATAATAAATCAGAAGCTAACGGTCTTATGATTGCATACGATGAGCAA
AAAGTGGCTGATAAGATAGCGAGCTTACCTTTTGATTTAACGGGTGGGCAAAAGCGCAGTCTTAGTGATATTTTGTCTGA
TATGCGCTCTGGTGGCCATATGAACCGCCTTTTGCAAGGGGATGTTGGTTCTGGTAAGACGGTAGTTGCAAGTCTTGCCA
TGTATGCAGCCTACACGGCTGGTTTTCAATCAGCTTTAATGGTGCCAACAGAAATTTTGGCTGAACAACATTTTGAGAGT
TTAATACAGCTTTTCCCTGATTTATCCATTGCTATCTTGACGTCAGGTATGAAGGCAGCTAATAAAAAAGCCGCTCTTGC
TGTGATTGCGGATGGTTCTGTGGATATGATTGTGGGAACGCATGCGCTGATTCAAGATGCGGTGAGCTACCATCGTCTAG
GACTTGTTATTACAGATGAGCAGCACCGATTCGGGGTCAATCAACGTCGTATTTTCCGTGAAAAAGGCGAAAATCCTGAT
GTGCTTATGATGACAGCGACACCTATTCCACGTACGCTTGCTATTACCGCTTTTGGTGAAATGGATGTTTCCATTATTGA
TGAATTGCCTGCAGGGCGAAAACCAATTATCACACGCTGGGTTAAGCATGAGCAGTTGGATGTTGTCCTTGATTGGGTCA
AAAAGGAATTGCAAAAAGGTGCGCAAGCCTATGTTATTTCACCATTGATTGAGGAATCTGAATCTCTGGATTTGAAAAAT
GCGATTGCTTTGCATGAAGATTTGTCTGAGTATTTTGCAGGATGTGCCAATGTCGCTTTGATGCACGGACGCATGAAAAA
TGACGAAAAAGAAGCCATTATGCAAGATTTCAAGGCGCAAAAAAGTCAGGTTCTGGTATCAACGACAGTTATTGAAGTTG
GTGTCAATGTGCCAAATGCAACTATCATGATTATCATGGATGCTGATCGTTTTGGGCTTAGTCAGCTACATCAGCTGCGC
GGGCGTGTCGGACGTGGGCAAAAACAATCGTATGCTATTTTAGTCGCAAATCCTAAGACTCAGACAGGTAAGGAACGCAT
GAAAATCATGACAGAAACCACAGATGGTTTTGTCTTGGCAGAAGCTGACCTTAAAATGCGTGGCTCAGGTGAAATCTTCG
GAACACGCCAATCAGGAATTCCAGAATTCCAAGTGGCTGATATCGTTGAAGATTATAATATTCTTGAAGAGGCAAGGCGT
GTTGCAAGTCAGATTGTTTCAGAAAAAGATTGGAAAAGCAACCCACAGTGGCAAGTCATTAGCCAAAATCTCAAAGATAA
AGGGAATTTCGATTAA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(257-411)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)

Helicase conserved C-terminal domain (Helicase_C)

(453-566)

RecG wedge domain (RecG_wedge)

(10-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A091CBD1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

70.939

100

0.709
  recG/mmsA Streptococcus pneumoniae R36A

70.939

100

0.709
  recG Bacillus subtilis subsp. subtilis str. 168

50.371

100

0.505
  recG Neisseria meningitidis strain C311

39.065

98.808

0.386