Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAH980_RS08675 Genome accession   NZ_CP154856
Coordinates   1869822..1870205 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain Ab25     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1864822..1875205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH980_RS08660 (AAH980_08660) - 1866711..1868792 (-) 2082 WP_284080691.1 methyl-accepting chemotaxis protein -
  AAH980_RS08665 (AAH980_08665) - 1868839..1869375 (-) 537 WP_004885375.1 chemotaxis protein CheW -
  AAH980_RS08670 (AAH980_08670) - 1869433..1869795 (-) 363 WP_002051151.1 response regulator -
  AAH980_RS08675 (AAH980_08675) pilG 1869822..1870205 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AAH980_RS08680 (AAH980_08680) - 1870488..1871126 (+) 639 WP_004885373.1 hypothetical protein -
  AAH980_RS08685 (AAH980_08685) - 1871186..1872304 (+) 1119 WP_151763494.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=994071 AAH980_RS08675 WP_000389061.1 1869822..1870205(-) (pilG) [Acinetobacter nosocomialis strain Ab25]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=994071 AAH980_RS08675 WP_000389061.1 1869822..1870205(-) (pilG) [Acinetobacter nosocomialis strain Ab25]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGTGAAGGTTGTGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCAAATCCGGATA
TCGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTCTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCATTTAGCAAAGATGAATTGTTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment