Detailed information NTG0993543

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AAIB13_RS08100
• Genome accession: NZ_CP154470
• Coordinates: 1702734..1703798 (+)
• Length: 354 a.a.
• NCBI ID: WP_005724816.1
• Uniprot ID: P95526
• Organism: Pasteurella multocida strain Pm6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1697734..1708798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAIB13_RS08095 (AAIB13_08095)	-	1700826..1702424 (-)	1599	WP_016534427.1	SrfA family protein	-
AAIB13_RS08100 (AAIB13_08100)	recA	1702734..1703798 (+)	1065	WP_005724816.1	recombinase RecA	Machinery gene
AAIB13_RS08105 (AAIB13_08105)	recX	1703908..1704363 (+)	456	WP_014391550.1	recombination regulator RecX	-
AAIB13_RS08110 (AAIB13_08110)	-	1704458..1705723 (-)	1266	WP_010907354.1	heme biosynthesis protein HemY	-
AAIB13_RS08115 (AAIB13_08115)	-	1705736..1707139 (-)	1404	WP_014391551.1	uroporphyrinogen-III C-methyltransferase	-
AAIB13_RS08120 (AAIB13_08120)	-	1707180..1707926 (-)	747	WP_014391552.1	uroporphyrinogen-III synthase	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37906.53 Da
• Isoelectric Point: 5.1857

>NTDB_id=993543 AAIB13_RS08100 WP_005724816.1 1702734..1703798(+) (recA) [Pasteurella multocida strain Pm6]
MATKEEKNKALAAALGQIEKQFGKGSIMKLGDTQALDVEAVSTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKEGKTCAFIDAEHALDPIYAAKLGVNVNELLVSQPDNGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEM
GDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVIG
NETRVKVVKNKVAAPFRQVDFQILYGQGISKTGELIELGVKHKLVDKAGAWYAYNGEKIGQGKANAMKWLEEHPEEALAL
ETKLRNELLANPEKVLAADIAEKNESSTGLEADY

Nucleotide

• Length: 1065 bp

>NTDB_id=993543 AAIB13_RS08100 WP_005724816.1 1702734..1703798(+) (recA) [Pasteurella multocida strain Pm6]
ATGGCAACAAAAGAAGAAAAAAATAAAGCACTGGCAGCAGCACTTGGGCAGATTGAAAAACAATTTGGGAAAGGCTCTAT
TATGAAATTGGGCGATACCCAAGCCTTGGATGTTGAAGCCGTGTCAACAGGCTCCTTAAGCCTCGACGTCGCACTTGGCA
TTGGCGGGTTACCAATGGGCCGTATTGTTGAAATTTTCGGACCTGAATCTTCCGGTAAAACCACCTTAACCCTTTCTGTC
ATTGCGCAAGCACAAAAAGAAGGCAAAACCTGTGCCTTTATTGACGCAGAACACGCATTAGATCCAATTTATGCCGCTAA
ACTGGGCGTCAATGTGAATGAACTGTTAGTTTCCCAACCTGATAACGGTGAACAAGCACTCGAAATTTGCGATGCGTTAG
TGCGTTCAGGTGCAGTAGATGTGATCATTGTAGACTCAGTCGCAGCATTAACCCCGAAAGCGGAAATTGAAGGAGAAATG
GGTGACTCACACATGGGCTTACAAGCACGTTTGATGTCACAAGCATTACGTAAACTCACTGGACAAATCAAAAACTCAAA
TTGCTTAGTGGTCTTTATTAACCAAATCCGTATGAAAATTGGTGTTATGTTCGGTAACCCAGAAACCACAACAGGGGGTA
ATGCACTAAAATTCTATGCCTCTGTACGTTTAGATATTCGCCGTACGGGTGCGATTAAAGAAGGTGAAGAAGTGATCGGT
AACGAAACCCGTGTCAAAGTGGTGAAAAACAAAGTGGCGGCACCATTCCGTCAAGTAGATTTCCAAATTCTTTACGGTCA
AGGTATTTCTAAAACAGGCGAGCTCATCGAGTTAGGCGTAAAACACAAATTAGTGGATAAAGCAGGTGCATGGTACGCTT
ACAATGGTGAAAAAATCGGTCAAGGTAAAGCTAACGCGATGAAATGGTTAGAAGAGCATCCTGAAGAAGCATTGGCTTTA
GAAACGAAATTACGCAATGAGTTGCTCGCGAATCCAGAAAAAGTACTCGCGGCAGACATTGCGGAAAAAAATGAAAGCTC
TACGGGCTTAGAAGCGGATTATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: P95526

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	80.967	93.503	0.757
recA	Vibrio cholerae O1 biovar El Tor strain E7946	80.967	93.503	0.757
recA	Glaesserella parasuis strain SC1401	76.385	96.893	0.74
recA	Pseudomonas stutzeri DSM 10701	75.148	95.48	0.718
recA	Acinetobacter baylyi ADP1	71.557	94.35	0.675
recA	Acinetobacter baumannii D1279779	72.308	91.808	0.664
recA	Neisseria gonorrhoeae MS11	72.981	90.96	0.664
recA	Neisseria gonorrhoeae MS11	72.981	90.96	0.664
recA	Neisseria gonorrhoeae strain FA1090	72.981	90.96	0.664
recA	Ralstonia pseudosolanacearum GMI1000	73.016	88.983	0.65
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.349	93.785	0.585
recA	Helicobacter pylori strain NCTC11637	60.947	95.48	0.582
recA	Streptococcus pneumoniae D39	58.239	99.435	0.579
recA	Streptococcus pneumoniae Rx1	58.239	99.435	0.579
recA	Streptococcus pneumoniae R6	58.239	99.435	0.579
recA	Streptococcus pneumoniae TIGR4	58.239	99.435	0.579
recA	Helicobacter pylori 26695	60.355	95.48	0.576
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.462	91.808	0.573
recA	Streptococcus mitis NCTC 12261	57.345	100	0.573
recA	Bacillus subtilis subsp. subtilis str. 168	63.125	90.395	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.468	92.373	0.568
recA	Streptococcus mutans UA159	56.657	99.718	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	60.559	90.96	0.551
recA	Streptococcus mitis SK321	60.185	91.525	0.551
recA	Streptococcus pyogenes NZ131	59.692	91.808	0.548
recA	Lactococcus lactis subsp. cremoris KW2	58.951	91.525	0.54