Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AAHT65_RS09075 Genome accession   NZ_CP154443
Coordinates   1769904..1770854 (+) Length   316 a.a.
NCBI ID   WP_258728611.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SW     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1764904..1775854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT65_RS09050 (AAHT65_09050) rapC 1766196..1767344 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  AAHT65_RS09055 (AAHT65_09055) phrC 1767328..1767447 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AAHT65_RS09060 (AAHT65_09060) - 1767582..1767689 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  AAHT65_RS09065 (AAHT65_09065) - 1767894..1768001 (-) 108 WP_035192051.1 YjcZ family sporulation protein -
  AAHT65_RS09070 (AAHT65_09070) - 1768108..1769472 (-) 1365 WP_004430267.1 aspartate kinase -
  AAHT65_RS09075 (AAHT65_09075) ceuB 1769904..1770854 (+) 951 WP_258728611.1 ABC transporter permease Machinery gene
  AAHT65_RS09080 (AAHT65_09080) - 1770847..1771794 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -
  AAHT65_RS09085 (AAHT65_09085) - 1771788..1772546 (+) 759 WP_063638742.1 ABC transporter ATP-binding protein -
  AAHT65_RS09090 (AAHT65_09090) - 1772568..1773521 (+) 954 WP_088116507.1 siderophore ABC transporter substrate-binding protein -
  AAHT65_RS09095 (AAHT65_09095) - 1773812..1775230 (-) 1419 WP_343311386.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34953.47 Da        Isoelectric Point: 9.8731

>NTDB_id=993428 AAHT65_RS09075 WP_258728611.1 1769904..1770854(+) (ceuB) [Bacillus atrophaeus strain SW]
MKLRYLVVLLILLAFCSIFIGVEDLSPLDLFHMNKEEASTLFASRLPRLISIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLIKMLIAFIFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNISSWLQGDFSLIVKGRYELLFLSIPLVIIAYVFADKFTVAGMGESFSVNLGLKYKRIVNIGLIISSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLLCDILGRIIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=993428 AAHT65_RS09075 WP_258728611.1 1769904..1770854(+) (ceuB) [Bacillus atrophaeus strain SW]
ATGAAGCTACGTTACTTAGTTGTTTTACTTATTTTACTTGCATTCTGTTCTATTTTTATCGGCGTAGAGGATCTGTCGCC
GCTGGATCTTTTTCATATGAATAAAGAAGAGGCTTCAACGCTTTTCGCCAGCCGTTTACCGAGATTAATCAGCATTATTA
TTGCAGGCATGAGCCTGAGCATCTGCGGTTTAATTATGCAGCAGATCAGCCGGAATAAATTCGTTTCGCCGACAACTGCC
GGCACGATGGATTGGGCGAGGCTCGGGATTTTGATTTCATTAATGCTGTTTACCTCTGCCAGTCCGCTGATAAAAATGCT
GATTGCTTTTATATTTGCGCTTGCGGGCAACTTCCTGTTCATGAAAATCCTTGAGAGAATAAAGTTTAATGATACGATCT
TTATTCCTCTCGTGGGCTTAATGCTTGGGAACATTGTCAGCTCGATTGCGACGTTTATCGCGTATAAATATGATTTAATC
CAAAATATTTCTTCATGGCTTCAAGGAGACTTCTCTCTCATTGTGAAAGGGAGATATGAACTTTTATTCTTGAGTATCCC
GCTTGTGATAATCGCATATGTATTTGCTGACAAATTCACAGTAGCAGGAATGGGGGAAAGCTTCTCCGTCAACCTTGGCC
TGAAATATAAACGGATTGTGAATATCGGGCTGATTATATCGTCGCTGATCACGTCCCTCGTGATTTTGACTGTCGGTATG
CTGCCGTTCCTTGGGCTAATCATTCCGAATATCGTATCCATTTACAGGGGAGACAACCTGAAAAGCAGCCTGCCCCACAC
AGCTCTTTTAGGTGCCGTTTTTGTGCTGCTTTGCGATATATTGGGCAGGATTATCATTTTTCCGTACGAAATCTCGATTG
GCTTGATGGTCGGAGTCATCGGCAGCGGTATTTTCCTGTATATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment