Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | AAHT65_RS09050 | Genome accession | NZ_CP154443 |
| Coordinates | 1766196..1767344 (+) | Length | 382 a.a. |
| NCBI ID | WP_004430265.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus strain SW | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1761196..1772344
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAHT65_RS09030 (AAHT65_09030) | - | 1761519..1762199 (-) | 681 | WP_343311382.1 | ABC transporter ATP-binding protein | - |
| AAHT65_RS09035 (AAHT65_09035) | - | 1762217..1763695 (-) | 1479 | WP_343311383.1 | ABC transporter permease | - |
| AAHT65_RS09040 (AAHT65_09040) | - | 1763909..1764595 (+) | 687 | WP_343311384.1 | response regulator transcription factor | - |
| AAHT65_RS09045 (AAHT65_09045) | - | 1764582..1765997 (+) | 1416 | WP_343311385.1 | HAMP domain-containing sensor histidine kinase | - |
| AAHT65_RS09050 (AAHT65_09050) | rapC | 1766196..1767344 (+) | 1149 | WP_004430265.1 | tetratricopeptide repeat protein | Regulator |
| AAHT65_RS09055 (AAHT65_09055) | phrC | 1767328..1767447 (+) | 120 | WP_004430266.1 | PhrC/PhrF family phosphatase-inhibitory pheromone | Regulator |
| AAHT65_RS09060 (AAHT65_09060) | - | 1767582..1767689 (-) | 108 | WP_072053240.1 | YjcZ family sporulation protein | - |
| AAHT65_RS09065 (AAHT65_09065) | - | 1767894..1768001 (-) | 108 | WP_035192051.1 | YjcZ family sporulation protein | - |
| AAHT65_RS09070 (AAHT65_09070) | - | 1768108..1769472 (-) | 1365 | WP_004430267.1 | aspartate kinase | - |
| AAHT65_RS09075 (AAHT65_09075) | ceuB | 1769904..1770854 (+) | 951 | WP_258728611.1 | ABC transporter permease | Machinery gene |
| AAHT65_RS09080 (AAHT65_09080) | - | 1770847..1771794 (+) | 948 | WP_010789704.1 | iron chelate uptake ABC transporter family permease subunit | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 45756.03 Da Isoelectric Point: 4.8173
>NTDB_id=993426 AAHT65_RS09050 WP_004430265.1 1766196..1767344(+) (rapC) [Bacillus atrophaeus strain SW]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI
Nucleotide
Download Length: 1149 bp
>NTDB_id=993426 AAHT65_RS09050 WP_004430265.1 1766196..1767344(+) (rapC) [Bacillus atrophaeus strain SW]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGTCATTT
TGTTTTCGGAGTAAACTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCTCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGTCATTT
TGTTTTCGGAGTAAACTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCTCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
85.079 |
100 |
0.851 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
57.368 |
99.476 |
0.571 |