Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   AAHT65_RS09055 Genome accession   NZ_CP154443
Coordinates   1767328..1767447 (+) Length   39 a.a.
NCBI ID   WP_004430266.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SW     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1762328..1772447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT65_RS09040 (AAHT65_09040) - 1763909..1764595 (+) 687 WP_343311384.1 response regulator transcription factor -
  AAHT65_RS09045 (AAHT65_09045) - 1764582..1765997 (+) 1416 WP_343311385.1 HAMP domain-containing sensor histidine kinase -
  AAHT65_RS09050 (AAHT65_09050) rapC 1766196..1767344 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  AAHT65_RS09055 (AAHT65_09055) phrC 1767328..1767447 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AAHT65_RS09060 (AAHT65_09060) - 1767582..1767689 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  AAHT65_RS09065 (AAHT65_09065) - 1767894..1768001 (-) 108 WP_035192051.1 YjcZ family sporulation protein -
  AAHT65_RS09070 (AAHT65_09070) - 1768108..1769472 (-) 1365 WP_004430267.1 aspartate kinase -
  AAHT65_RS09075 (AAHT65_09075) ceuB 1769904..1770854 (+) 951 WP_258728611.1 ABC transporter permease Machinery gene
  AAHT65_RS09080 (AAHT65_09080) - 1770847..1771794 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4111.89 Da        Isoelectric Point: 7.9858

>NTDB_id=993427 AAHT65_RS09055 WP_004430266.1 1767328..1767447(+) (phrC) [Bacillus atrophaeus strain SW]
MKLKSKLLIICLAAAAVFATVGVSNAEAPDYQVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=993427 AAHT65_RS09055 WP_004430266.1 1767328..1767447(+) (phrC) [Bacillus atrophaeus strain SW]
ATGAAATTGAAATCTAAATTGCTCATTATTTGTTTGGCTGCAGCTGCTGTGTTTGCAACAGTTGGAGTGTCCAATGCTGA
AGCGCCTGATTATCAGGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

75

100

0.769

Multiple sequence alignment