Detailed information NTG0099303

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QMG95_RS17285
• Genome accession: NZ_AP027045
• Coordinates: 3737921..3738937 (-)
• Length: 338 a.a.
• NCBI ID: WP_200766248.1
• Uniprot ID: -
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3732921..3743937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG95_RS17260 (TUMSATVNIG1_33650)	aroK	3733789..3734307 (-)	519	WP_004405322.1	shikimate kinase AroK	-
QMG95_RS17265 (TUMSATVNIG1_33660)	pilQ	3734497..3736242 (-)	1746	WP_200766247.1	type IV pilus secretin PilQ family protein	Machinery gene
QMG95_RS17270 (TUMSATVNIG1_33670)	pilP	3736279..3736791 (-)	513	WP_022593066.1	pilus assembly protein PilP	Machinery gene
QMG95_RS17275 (TUMSATVNIG1_33680)	pilO	3736784..3737371 (-)	588	WP_004405328.1	type 4a pilus biogenesis protein PilO	Machinery gene
QMG95_RS17280 (TUMSATVNIG1_33690)	pilN	3737368..3737928 (-)	561	WP_004405329.1	PilN domain-containing protein	Machinery gene
QMG95_RS17285 (TUMSATVNIG1_33700)	pilM	3737921..3738937 (-)	1017	WP_200766248.1	type IV pilus assembly protein PilM	Machinery gene
QMG95_RS17290 (TUMSATVNIG1_33710)	-	3739083..3741581 (+)	2499	WP_200766249.1	PBP1A family penicillin-binding protein	-
QMG95_RS17295 (TUMSATVNIG1_33720)	oxyR	3741637..3742518 (-)	882	WP_004405335.1	DNA-binding transcriptional regulator OxyR	-
QMG95_RS17300 (TUMSATVNIG1_33730)	-	3742697..3743428 (+)	732	WP_004405337.1	glutathione peroxidase	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 37126.37 Da
• Isoelectric Point: 6.4160

>NTDB_id=99303 QMG95_RS17285 WP_200766248.1 3737921..3738937(-) (pilM) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
MGRSLVVGIDFGHHSIKAVAMKPIGELMQLVGYNELTVPEDIFSENHTLDYQKIVKKLKELKKGLPLFSQQVAVSVPDKA
VISKVLQIEQDMDGREQEFAVHQAFGQQSPIPLEELSLDFFEVDQKVTTRSTTSTFQVYATRKEVVDSRVAALTKAGLKP
LTVDVHANSLLKVWRLASQVHPERRQWMLVDIGLNQTSLCTVAAGRTPFYKEVPFGTQNVAQSQEISESISLSSDSLTQG
FVRELGEKLQRHISLYNSVNPQQNVDGIWLSGGGANLVGITDMLSSELSLEVAQLNPFGLVENGTKKSIKQLSDSAAYGV
AMGLAISGVEWLKGNHHA

Nucleotide

• Length: 1017 bp

>NTDB_id=99303 QMG95_RS17285 WP_200766248.1 3737921..3738937(-) (pilM) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
ATGGGTAGATCTTTAGTAGTTGGCATCGATTTCGGTCATCACAGTATCAAAGCTGTCGCCATGAAACCCATTGGCGAGCT
AATGCAACTTGTTGGTTATAATGAGCTTACTGTACCCGAAGATATTTTCTCTGAAAACCATACGCTCGATTATCAGAAGA
TTGTAAAGAAACTCAAAGAACTTAAAAAGGGCTTGCCTCTTTTTAGTCAACAAGTCGCAGTTTCCGTACCAGACAAGGCT
GTTATCAGCAAAGTTCTGCAAATTGAACAGGATATGGACGGCAGAGAACAAGAGTTTGCCGTTCATCAGGCTTTTGGCCA
GCAGTCTCCCATTCCATTGGAAGAGTTGAGTTTAGACTTCTTCGAAGTGGATCAAAAAGTCACCACGCGAAGCACCACAT
CTACCTTTCAGGTTTATGCTACTCGCAAAGAAGTGGTTGATTCGCGAGTTGCGGCATTAACGAAAGCAGGGTTAAAGCCT
TTGACGGTTGATGTGCACGCCAACAGCCTATTAAAAGTCTGGCGTCTTGCCAGTCAGGTTCATCCGGAACGCCGACAGTG
GATGCTGGTGGATATCGGGTTGAATCAAACGTCTTTATGCACGGTTGCCGCGGGAAGAACCCCTTTCTATAAAGAAGTGC
CTTTCGGTACCCAGAACGTGGCTCAGTCACAAGAAATTTCTGAATCCATCTCTTTAAGCAGCGATTCTCTTACACAAGGG
TTTGTCAGAGAGTTAGGCGAAAAGCTGCAGCGCCACATTAGCCTTTATAACTCCGTTAATCCTCAGCAAAACGTCGATGG
GATCTGGCTTAGTGGTGGCGGTGCCAATCTGGTTGGTATCACGGACATGCTGAGCAGCGAGCTTTCCCTTGAAGTGGCAC
AACTGAACCCGTTTGGTTTAGTGGAAAACGGCACTAAGAAGTCGATAAAGCAATTGTCTGATTCTGCCGCGTATGGTGTG
GCCATGGGGCTGGCGATCAGTGGAGTAGAATGGCTGAAAGGAAATCACCATGCATAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (239-327)

• Type IV pilus assembly protein PilM; (PilM_2) (8-223)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	54.706	100	0.55
pilM	Vibrio campbellii strain DS40M4	44.675	100	0.447