Detailed information NTG0991133

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: VV34_RS16220
• Genome accession: NZ_LN649259
• Coordinates: 3062174..3063178 (-)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain BS49
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3057174..3068178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VV34_RS16195 (BS49_32360)	acuA	3058101..3058733 (+)	633	WP_003229296.1	acetoin utilization protein acetyltransferase AcuA	-
VV34_RS16200 (BS49_32370)	acuB	3058760..3059404 (+)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
VV34_RS16205 (BS49_32380)	acuC	3059401..3060564 (+)	1164	WP_004398517.1	acetoin utilization protein AcuC	-
VV34_RS16210 (BS49_32390)	motS	3060575..3061303 (-)	729	WP_003229290.1	flagellar motor protein MotS	-
VV34_RS16215 (BS49_32400)	motP	3061293..3062111 (-)	819	WP_004398692.1	flagellar motor protein MotP	-
VV34_RS16220 (BS49_32410)	ccpA	3062174..3063178 (-)	1005	WP_003229285.1	catabolite control protein A	Regulator
VV34_RS16225 (BS49_32420)	aroX	3063454..3064530 (-)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
VV34_RS16230 (BS49_32430)	ytxJ	3064766..3065092 (-)	327	WP_003229280.1	bacillithiol system redox-active protein YtxJ	-
VV34_RS16235 (BS49_32440)	ytxH	3065116..3065571 (-)	456	WP_004398549.1	YtxH domain-containing protein	-
VV34_RS16240 (BS49_32450)	ytxG	3065602..3066024 (-)	423	WP_003229276.1	DUF948 domain-containing protein	-
VV34_RS16245 (BS49_32460)	murC	3066186..3067484 (-)	1299	WP_003229274.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=991133 VV34_RS16220 WP_003229285.1 3062174..3063178(-) (ccpA) [Bacillus subtilis strain BS49]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=991133 VV34_RS16220 WP_003229285.1 3062174..3063178(-) (ccpA) [Bacillus subtilis strain BS49]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503