Detailed information NTG0991124

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: VV34_RS15165
• Genome accession: NZ_LN649259
• Coordinates: 2854174..2854779 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain BS49
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2849174..2859779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VV34_RS15135 (BS49_30220)	-	2849987..2850376 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
VV34_RS15140 (BS49_30230)	yajC	2850433..2850699 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
VV34_RS15145 (BS49_30240)	tgt	2850736..2851881 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
VV34_RS15150 (BS49_30250)	queA	2851908..2852936 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
VV34_RS15155 (BS49_30260)	yrzS	2852966..2853166 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
VV34_RS15160 (BS49_30270)	ruvB	2853159..2854163 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
VV34_RS15165 (BS49_30280)	ruvA	2854174..2854779 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
VV34_RS15170 (BS49_30290)	bofC	2854918..2855430 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
VV34_RS15175 (BS49_30300)	csbX	2855478..2856785 (-)	1308	WP_003246197.1	MFS transporter	-
VV34_RS15180 (BS49_30310)	iolG	2856856..2857881 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
VV34_RS15185 (BS49_30320)	yrzF	2858119..2858766 (+)	648	WP_003246159.1	phosphotransferase	-
VV34_RS23745 (BS49_30330)	-	2858812..2858934 (-)	123	WP_003229707.1	hypothetical protein	-
VV34_RS23750 (BS49_30340)	yrzH	2859019..2859309 (+)	291	WP_003246047.1	DUF5412 family protein	-
VV34_RS23180	-	2859316..2859456 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=991124 VV34_RS15165 WP_003229717.1 2854174..2854779(-) (ruvA) [Bacillus subtilis strain BS49]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=991124 VV34_RS15165 WP_003229717.1 2854174..2854779(-) (ruvA) [Bacillus subtilis strain BS49]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408