Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAHI06_RS26675 Genome accession   NZ_CP152477
Coordinates   5892892..5893299 (-) Length   135 a.a.
NCBI ID   WP_320749410.1    Uniprot ID   -
Organism   Pseudomonas salmasensis strain POE54     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5887892..5898299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHI06_RS26660 (AAHI06_26660) - 5889896..5891947 (-) 2052 WP_347169828.1 methyl-accepting chemotaxis protein -
  AAHI06_RS26665 (AAHI06_26665) - 5891944..5892468 (-) 525 WP_056783025.1 chemotaxis protein CheW -
  AAHI06_RS26670 (AAHI06_26670) pilH 5892480..5892845 (-) 366 WP_320749411.1 twitching motility response regulator PilH -
  AAHI06_RS26675 (AAHI06_26675) pilG 5892892..5893299 (-) 408 WP_320749410.1 twitching motility response regulator PilG Regulator
  AAHI06_RS26680 (AAHI06_26680) gshB 5893538..5894491 (+) 954 WP_003195061.1 glutathione synthase -
  AAHI06_RS26685 (AAHI06_26685) - 5894569..5895475 (+) 907 Protein_5246 energy transducer TonB -
  AAHI06_RS26690 (AAHI06_26690) - 5895624..5896193 (+) 570 WP_032894725.1 YqgE/AlgH family protein -
  AAHI06_RS26695 (AAHI06_26695) ruvX 5896193..5896631 (+) 439 Protein_5248 Holliday junction resolvase RuvX -
  AAHI06_RS26700 (AAHI06_26700) pyrR 5896780..5897286 (+) 507 WP_116667662.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14908.48 Da        Isoelectric Point: 7.3849

>NTDB_id=989644 AAHI06_RS26675 WP_320749410.1 5892892..5893299(-) (pilG) [Pseudomonas salmasensis strain POE54]
MEQHSNALKVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAFVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=989644 AAHI06_RS26675 WP_320749410.1 5892892..5893299(-) (pilG) [Pseudomonas salmasensis strain POE54]
ATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATTACGGCGATCGACGGTTTCGACGCCCTGGCCCGTATTGTCGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCTTTCAAA
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGGGCGATCAAGGCCTTTGTGCCTGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72

92.593

0.667
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment