Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   HMPREF9425_RS03370 Genome accession   NZ_GL831112
Coordinates   668421..669101 (+) Length   226 a.a.
NCBI ID   WP_003096778.1    Uniprot ID   A0ABP2KJH6
Organism   Streptococcus vestibularis ATCC 49124     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 663421..674101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9425_RS03350 (HMPREF9425_0695) - 664131..665480 (-) 1350 WP_003096770.1 MATE family efflux transporter -
  HMPREF9425_RS03355 (HMPREF9425_0696) - 665652..666068 (+) 417 WP_003096772.1 pyridoxamine 5'-phosphate oxidase family protein -
  HMPREF9425_RS03360 (HMPREF9425_0697) - 666121..667389 (-) 1269 WP_003096774.1 nucleobase:cation symporter-2 family protein -
  HMPREF9425_RS03365 (HMPREF9425_0698) - 667389..667970 (-) 582 WP_003096776.1 xanthine phosphoribosyltransferase -
  HMPREF9425_RS03370 (HMPREF9425_0699) braR 668421..669101 (+) 681 WP_003096778.1 response regulator transcription factor Regulator
  HMPREF9425_RS03375 (HMPREF9425_0700) - 669091..670065 (+) 975 WP_003096780.1 sensor histidine kinase -
  HMPREF9425_RS03380 (HMPREF9425_0701) - 670210..670968 (+) 759 WP_003094077.1 ABC transporter ATP-binding protein -
  HMPREF9425_RS03385 (HMPREF9425_0702) - 670970..672970 (+) 2001 WP_003096783.1 ABC transporter permease -
  HMPREF9425_RS03390 (HMPREF9425_0703) - 673055..673549 (+) 495 WP_003094156.1 YkgJ family cysteine cluster protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26173.47 Da        Isoelectric Point: 5.0304

>NTDB_id=989509 HMPREF9425_RS03370 WP_003096778.1 668421..669101(+) (braR) [Streptococcus vestibularis ATCC 49124]
MHKILLVEDDEVIRQQVKKILEQWGYEVVLVEDFMEVLSIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYRGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFERSGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKEFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=989509 HMPREF9425_RS03370 WP_003096778.1 668421..669101(+) (braR) [Streptococcus vestibularis ATCC 49124]
ATGCATAAGATTTTATTAGTTGAGGACGATGAGGTTATCCGTCAACAAGTCAAAAAAATACTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAGGATTTCATGGAAGTATTATCAATTTTTGTAAAAGAAGAACCCCACTTGGTTCTTATGGATATTG
GTTTACCTCTATTTAACGGTTATCACTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCCTCT
AGAGATCAAGCCATGGATATCGTTATGGCAATCAATATGGGTGGAGACGACTTTGTGACTAAACCATTTGACCAAAATGT
TCTCCTAGCGAAAATTCAAGGGCTTTTACGTCGTTCTTATGAGTTCGGTAAGGATCAGAGCCTCCTGGAATATAGAGGTG
TGATATTGAACCTCAAAGCCATGGATTTGGTTTATCAGGGAGAGGTCGTTTCTTTGACTAAAAATGAGTTTCAGATTTTA
CAAGTTCTCTTCGAGCGTTCTGGTAATATTGTTAGTCGTGAAGACCTCATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGATAATACACTCTCTGTAAATGTGGCACGTTTACGTAAGAAGTTAGAGGCAGTCGGTTTGAAGGAATTTATAGAAA
CCAAGAAAGGTGTCGGCTACGGGTTGCGTCATGATGGGTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

51.835

96.46

0.5
  micA Streptococcus pneumoniae Cp1015

35.47

100

0.367
  vicR Streptococcus mutans UA159

35.345

100

0.363