Detailed information NTG0989124

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: AAFQ93_RS00460
• Genome accession: NZ_CP152419
• Coordinates: 112095..113021 (-)
• Length: 308 a.a.
• NCBI ID: WP_375555344.1
• Uniprot ID: -
• Organism: Streptococcus nidrosiense strain SO-23-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 107095..118021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFQ93_RS00455 (AAFQ93_00455)	-	110666..111649 (-)	984	WP_375555343.1	acetylxylan esterase	-
AAFQ93_RS00460 (AAFQ93_00460)	amiF	112095..113021 (-)	927	WP_375555344.1	ATP-binding cassette domain-containing protein	Regulator
AAFQ93_RS00465 (AAFQ93_00465)	amiE	113032..114099 (-)	1068	WP_375555345.1	ABC transporter ATP-binding protein	Regulator
AAFQ93_RS00470 (AAFQ93_00470)	amiD	114108..115034 (-)	927	WP_049528229.1	oligopeptide ABC transporter permease OppC	Regulator
AAFQ93_RS00475 (AAFQ93_00475)	amiC	115034..116530 (-)	1497	WP_375555346.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34978.08 Da
• Isoelectric Point: 6.4048

>NTDB_id=989124 AAFQ93_RS00460 WP_375555344.1 112095..113021(-) (amiF) [Streptococcus nidrosiense strain SO-23-1]
MSEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSKGDIIFDGQKINGKKSRE
QASELIRRIQMIFQDPAASLNERATVDYIISEGLYNYHLFKDEEERKEKVQNIIREVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPVHPYTQALLSAVPIPDPILERKKVLKVYDPDQHDYETDKPSMVEIRPGHYVWANQAELERYKKDLK

Nucleotide

• Length: 927 bp

>NTDB_id=989124 AAFQ93_RS00460 WP_375555344.1 112095..113021(-) (amiF) [Streptococcus nidrosiense strain SO-23-1]
ATGTCTGAAAAATTAGTAGAAATTAAAGACTTAGAAATTTCCTTCGGTGAAGGAAGCAAAAAGTTTGTAGCTGTTAAAAA
TGCGAACTTCTTTATCAACAAAGGAGAAACTTTCTCACTTGTTGGAGAGTCTGGTAGTGGTAAAACAACGATTGGTCGTG
CCATTATCGGTCTTAATGATACCAGCAAAGGTGATATTATCTTTGATGGTCAAAAAATTAATGGGAAAAAATCACGTGAA
CAAGCTTCGGAATTAATCCGTCGTATCCAAATGATTTTCCAGGACCCTGCTGCAAGTTTGAATGAACGTGCAACGGTTGA
CTATATCATTTCTGAAGGTCTTTATAACTACCATTTATTTAAAGATGAAGAAGAAAGAAAAGAAAAAGTTCAAAATATCA
TTCGTGAAGTGGGACTTTTGGCTGAACACTTGACACGTTACCCACATGAGTTTTCAGGTGGACAACGTCAACGTATCGGG
ATTGCCCGTGCCTTGGTTATGCAACCTGACTTCGTTATTGCGGATGAGCCGATTTCAGCCTTGGACGTTTCAGTACGTGC
CCAAGTTTTGAACTTGCTCAAGAAATTCCAAAAGGAATTAGGCTTGACTTATCTCTTTATCGCCCACGATTTGTCAGTAG
TTCGTTTCATCTCTGATCGTATCGCGGTAATTTATAAGGGTGTCATTGTTGAAGTGGCTGAGACTGAAGAATTGTTTAAC
AATCCAGTTCATCCATACACGCAAGCACTTCTATCAGCTGTTCCTATTCCAGACCCAATCTTGGAACGTAAAAAAGTTTT
GAAAGTCTATGATCCAGATCAACATGACTATGAAACTGATAAACCTTCTATGGTAGAAATTCGTCCAGGTCACTATGTTT
GGGCAAACCAAGCTGAGTTGGAACGCTATAAAAAAGATTTGAAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	85.294	99.351	0.847
amiF	Streptococcus salivarius strain HSISS4	85.294	99.351	0.847
amiF	Streptococcus thermophilus LMD-9	84.967	99.351	0.844