Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACNR93_RS04550 Genome accession   NZ_CP184736
Coordinates   903869..904531 (-) Length   220 a.a.
NCBI ID   WP_024344090.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 898869..909531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS04530 (ACNR93_04530) - 899154..899486 (+) 333 WP_004231629.1 putative DNA-binding protein -
  ACNR93_RS04535 (ACNR93_04535) ffh 899532..901097 (+) 1566 WP_033152598.1 signal recognition particle protein -
  ACNR93_RS04540 (ACNR93_04540) xerS 901683..902753 (+) 1071 WP_420544037.1 tyrosine recombinase XerS Machinery gene
  ACNR93_RS04545 (ACNR93_04545) - 902928..903872 (-) 945 WP_420544038.1 sensor histidine kinase -
  ACNR93_RS04550 (ACNR93_04550) braR 903869..904531 (-) 663 WP_024344090.1 DNA-binding response regulator Regulator
  ACNR93_RS04555 (ACNR93_04555) - 904632..906617 (-) 1986 WP_420544039.1 FtsX-like permease family protein -
  ACNR93_RS04560 (ACNR93_04560) - 906619..907371 (-) 753 WP_420544040.1 ABC transporter ATP-binding protein -
  ACNR93_RS04565 (ACNR93_04565) - 907807..908628 (-) 822 WP_420544041.1 sugar phosphate isomerase/epimerase family protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25491.27 Da        Isoelectric Point: 4.8359

>NTDB_id=988897 ACNR93_RS04550 WP_024344090.1 903869..904531(-) (braR) [Streptococcus equinus strain NM-2-29]
MKQGKIYIVEDDQTIVTLLKQHLAKSYDVFSVNNFRAIKQEIEEIKPDLILMDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFISKPFSLTILDAKISAFLRRAYQFTSDNYQLDEFSLSRDGILSNGSEQINLSPTENKILSI
LFERQNQVVPKEELLEKLWENESFIDQNTLSVNMTRLRKKVQPIGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=988897 ACNR93_RS04550 WP_024344090.1 903869..904531(-) (braR) [Streptococcus equinus strain NM-2-29]
ATGAAACAAGGAAAAATTTATATTGTCGAAGACGATCAAACCATTGTAACTTTGCTAAAGCAGCACTTAGCTAAATCCTA
TGACGTTTTTAGTGTCAACAATTTTCGTGCTATTAAGCAAGAGATCGAAGAAATAAAACCAGATCTTATTTTGATGGATA
TTACACTGCCTTACTTTAATGGCTTTTACTGGACGACCGAAATCCGTAAAACCATGACTTTACCTATTATTTTTATCTCT
TCAAGCGATGATGAAATGGATACTGTCATGGCACTTAACATGGGAGGAGATGACTTTATCTCTAAACCATTCTCTCTAAC
TATTTTGGATGCCAAGATTTCAGCATTTTTGCGTAGAGCATACCAGTTCACTTCTGATAACTATCAACTTGATGAGTTTT
CACTGTCACGTGATGGTATTTTGTCAAATGGAAGTGAGCAAATTAATCTTTCTCCAACAGAAAATAAAATTCTAAGCATC
TTGTTTGAGCGTCAAAATCAAGTCGTCCCAAAAGAAGAATTGCTAGAAAAACTATGGGAGAACGAAAGTTTTATCGACCA
AAATACTTTGAGTGTTAACATGACACGCCTACGTAAAAAAGTGCAGCCAATTGGCTTTGATCGCATCCATACCGTGAGAG
GAGTAGGGTACCTTCTAAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)

Response regulator receiver domain (Response_reg)

(6-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.083

99.091

0.486
  vicR Streptococcus mutans UA159

34.632

100

0.364

Multiple sequence alignment