Detailed information NTG0988746

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: AAGF34_RS14465
• Genome accession: NZ_CP152376
• Coordinates: 3095085..3096380 (+)
• Length: 431 a.a.
• NCBI ID: WP_342616428.1
• Uniprot ID: -
• Organism: Rhodoferax sp. GW822-FHT02A01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3090085..3101380

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAGF34_RS14455 (AAGF34_14455)	-	3091901..3092896 (-)	996	WP_342616426.1	AAA family ATPase	-
AAGF34_RS14460 (AAGF34_14460)	-	3093038..3094969 (-)	1932	WP_342616427.1	YhgE/Pip domain-containing protein	-
AAGF34_RS14465 (AAGF34_14465)	pilU	3095085..3096380 (+)	1296	WP_342616428.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
AAGF34_RS14470 (AAGF34_14470)	-	3096744..3097991 (+)	1248	WP_342616429.1	aromatic ring-hydroxylating dioxygenase subunit alpha	-
AAGF34_RS14475 (AAGF34_14475)	-	3098002..3099102 (+)	1101	WP_342616430.1	hybrid-cluster NAD(P)-dependent oxidoreductase	-
AAGF34_RS14480 (AAGF34_14480)	-	3099187..3100233 (+)	1047	WP_342616431.1	homocysteine S-methyltransferase family protein	-

Sequence

Protein

• Length: 431 a.a.
• Molecular weight: 48600.42 Da
• Isoelectric Point: 7.0182

>NTDB_id=988746 AAGF34_RS14465 WP_342616428.1 3095085..3096380(+) (pilU) [Rhodoferax sp. GW822-FHT02A01]
MSTLNEEQARAYMHKLLAAMSQAGGSDLFIANDFPPSMKAHGSMQPLTNQKLNGEMTKMFAHSLMNEKQRAEFAKEMECN
FAISIPGVSRFRVNVYVQQQNVAMVVRTIASEIPNFEKLSLPPVLKDVIMNKRGLVLVVGGTGSGKSTSLAAMIDYRNHT
SAGHIITVEDPVEYVHVSKKSLVSHREVGVDTHSWHHALKNTLRQAPDVILIGEIRDPETMEHAIAFAETGHLCLGTLHA
NSANQAIDRIINFFPEDRRNQLLMDLSANLRAIISQRLVRTEDGKGRKAAIEILLNTPTIAERIFKGQFGDIKTIMERSR
ELGMRTFDWALYELYDEGHISFEEAIRNADSANELRLAIKLKSRRGEPPGADGPTLSFDKEPTPEELEVMRQEEQRKQAE
RKRQLENEELERKLKEKGLDSRFTDSRISTQ

Nucleotide

• Length: 1296 bp

>NTDB_id=988746 AAGF34_RS14465 WP_342616428.1 3095085..3096380(+) (pilU) [Rhodoferax sp. GW822-FHT02A01]
ATGTCTACCTTGAACGAAGAGCAGGCCCGCGCCTACATGCACAAACTCCTGGCCGCCATGAGCCAGGCCGGTGGGTCGGA
TCTGTTCATTGCCAACGACTTTCCCCCCAGCATGAAGGCCCACGGCAGCATGCAGCCGCTGACCAACCAGAAGCTCAACG
GTGAGATGACCAAGATGTTCGCCCACTCCCTGATGAACGAGAAGCAGCGCGCCGAGTTCGCCAAGGAGATGGAATGCAAC
TTTGCCATCAGCATTCCCGGCGTGTCGCGTTTTCGCGTCAACGTCTATGTGCAGCAGCAGAACGTGGCCATGGTGGTGCG
CACCATTGCCTCCGAGATTCCCAATTTCGAGAAGCTCTCGTTGCCGCCCGTGCTCAAGGACGTCATCATGAACAAGCGCG
GGCTGGTGCTGGTGGTCGGCGGCACCGGCTCAGGCAAGTCCACCTCGCTAGCCGCCATGATCGACTACCGCAACCACACC
TCGGCTGGGCACATCATCACGGTGGAAGACCCGGTGGAATACGTGCATGTCTCCAAGAAGTCGCTGGTGAGCCACCGCGA
AGTGGGAGTGGACACCCACAGCTGGCACCATGCGCTGAAGAACACCTTGCGCCAGGCGCCGGACGTGATCCTGATCGGCG
AGATCCGCGACCCCGAGACCATGGAGCACGCCATTGCCTTTGCCGAAACCGGCCACCTGTGCCTGGGCACCTTGCACGCC
AACAGCGCCAACCAGGCCATAGACCGCATCATCAATTTCTTCCCGGAAGACCGGCGCAACCAGCTGCTGATGGACCTGTC
GGCCAACCTGCGCGCCATCATCTCGCAGCGGCTGGTGCGCACCGAAGACGGCAAGGGGCGCAAGGCAGCCATCGAGATCC
TGCTCAACACGCCCACGATTGCCGAGCGCATTTTCAAAGGCCAGTTCGGCGACATCAAGACCATCATGGAACGATCGCGC
GAACTGGGCATGCGCACCTTTGACTGGGCCCTGTACGAACTGTATGACGAGGGCCACATCAGCTTCGAGGAAGCCATCCG
CAATGCCGACTCCGCCAACGAGCTGCGCCTTGCCATCAAGCTCAAGAGCCGCCGTGGCGAGCCGCCCGGCGCGGACGGCC
CAACCCTGTCTTTCGACAAGGAACCCACGCCCGAAGAGCTCGAAGTCATGCGCCAGGAGGAGCAGCGCAAACAGGCCGAG
CGCAAGCGTCAGCTGGAGAACGAGGAACTGGAGCGCAAGCTCAAGGAAAAGGGCCTGGACAGCCGTTTCACCGACAGCCG
CATCAGCACCCAATAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (122-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.599	80.974	0.483
pilU	Acinetobacter baylyi ADP1	51.977	82.135	0.427
pilU	Vibrio cholerae strain A1552	48.468	83.295	0.404