Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | WN937_RS14630 | Genome accession | NZ_CP152363 |
| Coordinates | 3077793..3078437 (+) | Length | 214 a.a. |
| NCBI ID | WP_069537160.1 | Uniprot ID | A0AA47JFQ5 |
| Organism | Vibrio parahaemolyticus strain vp-HL-201910 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3072793..3083437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WN937_RS14615 (WN937_14615) | - | 3073277..3074722 (-) | 1446 | WP_025535370.1 | hypothetical protein | - |
| WN937_RS14620 (WN937_14620) | csrD | 3074734..3076743 (-) | 2010 | WP_069537162.1 | RNase E specificity factor CsrD | - |
| WN937_RS14625 (WN937_14625) | ssb | 3076984..3077514 (-) | 531 | WP_005466625.1 | single-stranded DNA-binding protein | Machinery gene |
| WN937_RS14630 (WN937_14630) | qstR | 3077793..3078437 (+) | 645 | WP_069537160.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| WN937_RS14635 (WN937_14635) | galU | 3078695..3079567 (+) | 873 | WP_005466627.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| WN937_RS14640 (WN937_14640) | uvrA | 3079705..3082527 (+) | 2823 | WP_069537201.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24386.20 Da Isoelectric Point: 8.7760
>NTDB_id=988682 WN937_RS14630 WP_069537160.1 3077793..3078437(+) (qstR) [Vibrio parahaemolyticus strain vp-HL-201910]
MRKSAYARKLFLISMEDDAAQKVASLEKYIDMSIPVISTDALMEAKPEHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLAFGQLKGLFYSEDSLEQVGEGLKGIVNGQNWLPRNVTSQLLHYYRNVLNTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MRKSAYARKLFLISMEDDAAQKVASLEKYIDMSIPVISTDALMEAKPEHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLAFGQLKGLFYSEDSLEQVGEGLKGIVNGQNWLPRNVTSQLLHYYRNVLNTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=988682 WN937_RS14630 WP_069537160.1 3077793..3078437(+) (qstR) [Vibrio parahaemolyticus strain vp-HL-201910]
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATTAGTATGGAAGACGATGCTGCGCAGAAAGTCGCATCATTAGA
AAAGTACATCGATATGAGCATTCCTGTAATCTCAACCGATGCCCTAATGGAAGCGAAACCCGAACATCGAAATAAAATTC
TACTCATTGACTTCAGTGAACATAAATCACTCGTTCAATCGATTAAAAACCTGCCATTGGTTTGGAAGAACTTTGAGACG
GTCGTGTTCAACGTTCCAAAGCGCCTCACTACGGATGAACTGCTCGCCTTCGGTCAATTAAAAGGCTTGTTTTACAGCGA
AGATTCTTTAGAACAAGTAGGCGAAGGACTGAAAGGCATTGTCAACGGGCAAAACTGGCTACCACGCAACGTAACCAGCC
AACTGCTGCACTACTATCGAAATGTGCTAAATACTCACACCGCGCCAGCAACCGTCGATCTCACCATTCGTGAACTGCAA
GTGCTGCGTTGTCTGCAAGCCGGGGCATCGAATAGCCAGATGGCAGAAGAACTGTTTGTTAGCGAATTTACGATCAAGTC
GCACCTGTATCAGATCTTCAAAAAGCTCTCGGTGAAAAACCGAGTTCAAGCCATTGCTTGGGCCGATCAAAACTTGATGT
CTTAA
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATTAGTATGGAAGACGATGCTGCGCAGAAAGTCGCATCATTAGA
AAAGTACATCGATATGAGCATTCCTGTAATCTCAACCGATGCCCTAATGGAAGCGAAACCCGAACATCGAAATAAAATTC
TACTCATTGACTTCAGTGAACATAAATCACTCGTTCAATCGATTAAAAACCTGCCATTGGTTTGGAAGAACTTTGAGACG
GTCGTGTTCAACGTTCCAAAGCGCCTCACTACGGATGAACTGCTCGCCTTCGGTCAATTAAAAGGCTTGTTTTACAGCGA
AGATTCTTTAGAACAAGTAGGCGAAGGACTGAAAGGCATTGTCAACGGGCAAAACTGGCTACCACGCAACGTAACCAGCC
AACTGCTGCACTACTATCGAAATGTGCTAAATACTCACACCGCGCCAGCAACCGTCGATCTCACCATTCGTGAACTGCAA
GTGCTGCGTTGTCTGCAAGCCGGGGCATCGAATAGCCAGATGGCAGAAGAACTGTTTGTTAGCGAATTTACGATCAAGTC
GCACCTGTATCAGATCTTCAAAAAGCTCTCGGTGAAAAACCGAGTTCAAGCCATTGCTTGGGCCGATCAAAACTTGATGT
CTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
99.533 |
100 |
0.995 |
| qstR | Vibrio campbellii strain DS40M4 |
88.785 |
100 |
0.888 |
| qstR | Vibrio cholerae strain A1552 |
52.093 |
100 |
0.523 |