Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AAC934_RS16290 Genome accession   NZ_CP152362
Coordinates   3145597..3147816 (-) Length   739 a.a.
NCBI ID   WP_342623517.1    Uniprot ID   -
Organism   Bacillus subtilis strain LP     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3140597..3152816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC934_RS16250 (AAC934_16250) mrpB 3141064..3141495 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  AAC934_RS16255 (AAC934_16255) mrpC 3141495..3141836 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  AAC934_RS16260 (AAC934_16260) mrpD 3141829..3143310 (+) 1482 WP_019712488.1 Na+/H+ antiporter subunit D -
  AAC934_RS16265 (AAC934_16265) mrpE 3143316..3143792 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  AAC934_RS16270 (AAC934_16270) mrpF 3143792..3144076 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AAC934_RS16275 (AAC934_16275) mnhG 3144060..3144434 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  AAC934_RS16280 (AAC934_16280) yuxO 3144473..3144853 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  AAC934_RS16285 (AAC934_16285) comA 3144872..3145516 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  AAC934_RS16290 (AAC934_16290) comP 3145597..3147816 (-) 2220 WP_342623517.1 histidine kinase Regulator
  AAC934_RS16295 (AAC934_16295) comX 3147832..3148053 (-) 222 WP_014114983.1 competence pheromone ComX -
  AAC934_RS16300 (AAC934_16300) - 3148050..3148919 (-) 870 WP_277736668.1 polyprenyl synthetase family protein -
  AAC934_RS16305 (AAC934_16305) degQ 3149104..3149244 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AAC934_RS16310 (AAC934_16310) - 3149466..3149591 (+) 126 WP_003228793.1 hypothetical protein -
  AAC934_RS16315 (AAC934_16315) - 3149705..3150073 (+) 369 WP_014477834.1 hypothetical protein -
  AAC934_RS16320 (AAC934_16320) pdeH 3150049..3151278 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 739 a.a.        Molecular weight: 85911.46 Da        Isoelectric Point: 8.3715

>NTDB_id=988637 AAC934_RS16290 WP_342623517.1 3145597..3147816(-) (comP) [Bacillus subtilis strain LP]
MHRNNNFYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVNGQKGSE
IQLESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSPSAFVLILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYSVKLTVVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKDLTYKNHEQYVKNFSGDIGKIKEFKQGFIIKIGERGDRSFLVLCFSSYNTFK
LTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKLMYTIEEKQRSDLARDLHDSVLQDLISLKRQC
ELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLVKALSKLVAQQQERVPFHIRLNTGRFT
ASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMGLSGIKERVRALDGR
LRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2220 bp        

>NTDB_id=988637 AAC934_RS16290 WP_342623517.1 3145597..3147816(-) (comP) [Bacillus subtilis strain LP]
ATGCACAGAAATAATAACTTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCGGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATACAGATGAATATTATTCGGGTGTAAAAAAGGGTGACATCATTCTCGAAGTTAATGGGCAAAAAGGAAGTGAA
ATCCAGTTAGAAAGCGGAAGATTGGTCAATGTAGAAAGCTTAACTGTTGAAAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCGCTCATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTAAGAAAATCACCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTA
GCATATGTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTATCTACTTGTCCTTACTTTAGTAAGTTGTCC
GATTTTATATATACATTTCATATATAAATACTTTGCGGAATTGGGTACAAAGTTATTCAAAAAGAAGATTTTAATCATTA
TGTATATACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCAAAC
TTGAACTTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATTCTTATCCATCAAGGGATTAGAAAAATCAAACAAAA
TGAGCAAAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCCTTTATTATCTTTTTTGTTATTC
CCTATGTGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTGTAT
CAATTTATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACC
TACTGTTATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTCCGTTAAACTAACAGTTGTAA
TATATTTGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATTAAAGAGTTTAAAC
AAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTATAATACTTTTAAA
TTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACGTTATGAAAATCGA
AGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCG
AGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGT
GAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGA
GCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTGG
TGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTACG
GCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCA
GGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTG
ATCAAGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGC
CTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.267

100

0.575


Multiple sequence alignment