Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACOCIA_RS16070 | Genome accession | NZ_CP184611 |
| Coordinates | 3355170..3355580 (+) | Length | 136 a.a. |
| NCBI ID | WP_002017231.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain CQPMC-AB11 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3350170..3360580
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCIA_RS16055 (ACOCIA_16055) | - | 3351159..3353465 (+) | 2307 | WP_000259109.1 | RelA/SpoT family protein | - |
| ACOCIA_RS16060 (ACOCIA_16060) | - | 3353510..3354283 (-) | 774 | WP_000682841.1 | SDR family oxidoreductase | - |
| ACOCIA_RS16065 (ACOCIA_16065) | mazG | 3354395..3355201 (+) | 807 | WP_000359483.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| ACOCIA_RS16070 (ACOCIA_16070) | comEA | 3355170..3355580 (+) | 411 | WP_002017231.1 | ComEA family DNA-binding protein | Machinery gene |
| ACOCIA_RS16075 (ACOCIA_16075) | pcnB | 3355705..3357168 (+) | 1464 | WP_001194207.1 | polynucleotide adenylyltransferase PcnB | - |
| ACOCIA_RS16080 (ACOCIA_16080) | folK | 3357165..3357647 (+) | 483 | WP_000219213.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| ACOCIA_RS16085 (ACOCIA_16085) | panB | 3357693..3358502 (+) | 810 | WP_000624763.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| ACOCIA_RS16090 (ACOCIA_16090) | panC | 3358506..3359354 (+) | 849 | WP_000846362.1 | pantoate--beta-alanine ligase | - |
| ACOCIA_RS16095 (ACOCIA_16095) | rapZ | 3359377..3360228 (+) | 852 | WP_000821671.1 | RNase adapter RapZ | - |
| ACOCIA_RS16100 (ACOCIA_16100) | - | 3360225..3360494 (+) | 270 | WP_000567533.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 15654.89 Da Isoelectric Point: 10.3828
>NTDB_id=988034 ACOCIA_RS16070 WP_002017231.1 3355170..3355580(+) (comEA) [Acinetobacter baumannii strain CQPMC-AB11]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
Nucleotide
Download Length: 411 bp
>NTDB_id=988034 ACOCIA_RS16070 WP_002017231.1 3355170..3355580(+) (comEA) [Acinetobacter baumannii strain CQPMC-AB11]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii strain A118 |
97.794 |
100 |
0.978 |
| comEA | Acinetobacter baumannii D1279779 |
95.588 |
100 |
0.956 |
| comEA | Acinetobacter baylyi ADP1 |
42.748 |
96.324 |
0.412 |