Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHB69_RS11255 | Genome accession | NZ_CP152043 |
| Coordinates | 2194641..2194976 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-0994 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2189641..2199976
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHB69_RS11235 (MHB69_11235) | gcvT | 2190117..2191214 (-) | 1098 | WP_046311744.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHB69_RS11240 (MHB69_11240) | - | 2191776..2193446 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| MHB69_RS11245 (MHB69_11245) | - | 2193461..2194258 (+) | 798 | WP_342495563.1 | YqhG family protein | - |
| MHB69_RS11250 (MHB69_11250) | - | 2194443..2194607 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| MHB69_RS11255 (MHB69_11255) | sinR | 2194641..2194976 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHB69_RS11260 (MHB69_11260) | - | 2195044..2195844 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| MHB69_RS11265 (MHB69_11265) | - | 2195902..2196474 (-) | 573 | WP_342495564.1 | signal peptidase I | - |
| MHB69_RS11270 (MHB69_11270) | tapA | 2196527..2197054 (-) | 528 | WP_342495565.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHB69_RS11275 (MHB69_11275) | - | 2197354..2197632 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| MHB69_RS11280 (MHB69_11280) | - | 2197667..2197861 (-) | 195 | WP_024422974.1 | YqzE family protein | - |
| MHB69_RS11285 (MHB69_11285) | comGG | 2197921..2198304 (-) | 384 | WP_211043251.1 | competence type IV pilus minor pilin ComGG | - |
| MHB69_RS11290 (MHB69_11290) | comGF | 2198301..2198828 (-) | 528 | WP_342489525.1 | competence type IV pilus minor pilin ComGF | - |
| MHB69_RS11295 (MHB69_11295) | comGE | 2198740..2199054 (-) | 315 | WP_264315972.1 | competence type IV pilus minor pilin ComGE | - |
| MHB69_RS11300 (MHB69_11300) | comGD | 2199038..2199484 (-) | 447 | WP_342495566.1 | competence type IV pilus minor pilin ComGD | - |
| MHB69_RS11305 (MHB69_11305) | comGC | 2199477..2199770 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=986550 MHB69_RS11255 WP_024422969.1 2194641..2194976(+) (sinR) [Bacillus sp. FSL K6-0994]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986550 MHB69_RS11255 WP_024422969.1 2194641..2194976(+) (sinR) [Bacillus sp. FSL K6-0994]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |