Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   NST80_RS07220 Genome accession   NZ_CP152039
Coordinates   1569214..1570215 (-) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus sp. FSL K6-1323     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1564214..1575215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS07195 (NST80_07195) - 1564626..1564811 (+) 186 WP_002886071.1 hypothetical protein -
  NST80_RS07200 (NST80_07200) eno 1564963..1566267 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  NST80_RS07205 (NST80_07205) - 1566473..1566928 (+) 456 WP_049546187.1 YueI family protein -
  NST80_RS07210 (NST80_07210) - 1566959..1568074 (-) 1116 WP_118172261.1 glycerate kinase -
  NST80_RS07215 (NST80_07215) - 1568087..1569154 (-) 1068 WP_118172260.1 MmcQ/YjbR family DNA-binding protein -
  NST80_RS07220 (NST80_07220) ccpA 1569214..1570215 (-) 1002 WP_014634136.1 catabolite control protein A Regulator
  NST80_RS07225 (NST80_07225) - 1570528..1571610 (+) 1083 WP_118172258.1 Xaa-Pro peptidase family protein -
  NST80_RS07230 (NST80_07230) - 1571707..1572075 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  NST80_RS07235 (NST80_07235) - 1572077..1573483 (-) 1407 WP_014634134.1 Cof-type HAD-IIB family hydrolase -
  NST80_RS07240 (NST80_07240) smpB 1573630..1574094 (-) 465 WP_014634133.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=986331 NST80_RS07220 WP_014634136.1 1569214..1570215(-) (ccpA) [Streptococcus sp. FSL K6-1323]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=986331 NST80_RS07220 WP_014634136.1 1569214..1570215(-) (ccpA) [Streptococcus sp. FSL K6-1323]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTTATTCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCTACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACGCCGATTGTTCTAGCAGGAACAGTAGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACGCAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAATTCTGGT
GCCACTGCTGCCTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGTTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment