Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NST80_RS05520 Genome accession   NZ_CP152039
Coordinates   1234840..1235652 (-) Length   270 a.a.
NCBI ID   WP_013990680.1    Uniprot ID   A0AAX1YAX4
Organism   Streptococcus sp. FSL K6-1323     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1229840..1240652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS05490 (NST80_05490) - 1230039..1230803 (-) 765 Protein_1028 nucleoside phosphorylase -
  NST80_RS05495 (NST80_05495) - 1230808..1231674 (-) 867 WP_183138214.1 GNAT family N-acetyltransferase -
  NST80_RS05500 (NST80_05500) yidA 1231853..1232659 (+) 807 WP_004182607.1 sugar-phosphatase -
  NST80_RS05505 (NST80_05505) - 1232659..1233873 (+) 1215 WP_014633201.1 aminoacyltransferase -
  NST80_RS05510 (NST80_05510) - 1233975..1234251 (-) 277 Protein_1032 ISL3 family transposase -
  NST80_RS05515 (NST80_05515) - 1234422..1234781 (-) 360 WP_045769141.1 YbaN family protein -
  NST80_RS05520 (NST80_05520) vicX 1234840..1235652 (-) 813 WP_013990680.1 MBL fold metallo-hydrolase Regulator
  NST80_RS05525 (NST80_05525) vicK 1235658..1236998 (-) 1341 WP_002885062.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NST80_RS05530 (NST80_05530) vicR 1236991..1237698 (-) 708 WP_002884978.1 response regulator YycF Regulator
  NST80_RS05535 (NST80_05535) - 1237983..1238750 (+) 768 WP_038675884.1 amino acid ABC transporter ATP-binding protein -
  NST80_RS05540 (NST80_05540) - 1238760..1239593 (+) 834 WP_013990682.1 transporter substrate-binding domain-containing protein -
  NST80_RS05545 (NST80_05545) - 1239611..1240309 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30108.96 Da        Isoelectric Point: 5.3499

>NTDB_id=986323 NST80_RS05520 WP_013990680.1 1234840..1235652(-) (vicX) [Streptococcus sp. FSL K6-1323]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=986323 NST80_RS05520 WP_013990680.1 1234840..1235652(-) (vicX) [Streptococcus sp. FSL K6-1323]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTCGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCGACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAAATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGATACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767

Multiple sequence alignment