Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   NYE42_RS02025 Genome accession   NZ_CP152036
Coordinates   432174..432293 (+) Length   39 a.a.
NCBI ID   WP_265451313.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2865     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 427174..437293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE42_RS02010 (NYE42_02005) - 428786..429469 (+) 684 WP_007410267.1 response regulator transcription factor -
  NYE42_RS02015 (NYE42_02010) - 429456..430889 (+) 1434 WP_165913860.1 HAMP domain-containing sensor histidine kinase -
  NYE42_RS02020 (NYE42_02015) rapC 431042..432190 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  NYE42_RS02025 (NYE42_02020) phrC 432174..432293 (+) 120 WP_265451313.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NYE42_RS02030 (NYE42_02025) - 432441..432536 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  NYE42_RS02035 (NYE42_02030) - 432631..433995 (-) 1365 WP_095352403.1 aspartate kinase -
  NYE42_RS02040 (NYE42_02035) ceuB 434409..435362 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  NYE42_RS02045 (NYE42_02040) - 435352..436299 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  NYE42_RS02050 (NYE42_02045) - 436293..437051 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4244.95 Da        Isoelectric Point: 8.0284

>NTDB_id=986107 NYE42_RS02025 WP_265451313.1 432174..432293(+) (phrC) [Bacillus sp. FSL K6-2865]
MKLKSKWFVICLAAAAIFTVTGAGQTDQADFHVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=986107 NYE42_RS02025 WP_265451313.1 432174..432293(+) (phrC) [Bacillus sp. FSL K6-2865]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAACTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

75

100

0.769

Multiple sequence alignment