Detailed information NTG0986106

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NYE42_RS02020
• Genome accession: NZ_CP152036
• Coordinates: 431042..432190 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-2865
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 426042..437190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE42_RS02000 (NYE42_01995)	-	426439..427122 (-)	684	WP_059366584.1	ABC transporter ATP-binding protein	-
NYE42_RS02005 (NYE42_02000)	-	427137..428573 (-)	1437	WP_076425710.1	ABC transporter permease	-
NYE42_RS02010 (NYE42_02005)	-	428786..429469 (+)	684	WP_007410267.1	response regulator transcription factor	-
NYE42_RS02015 (NYE42_02010)	-	429456..430889 (+)	1434	WP_165913860.1	HAMP domain-containing sensor histidine kinase	-
NYE42_RS02020 (NYE42_02015)	rapC	431042..432190 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
NYE42_RS02025 (NYE42_02020)	phrC	432174..432293 (+)	120	WP_265451313.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NYE42_RS02030 (NYE42_02025)	-	432441..432536 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
NYE42_RS02035 (NYE42_02030)	-	432631..433995 (-)	1365	WP_095352403.1	aspartate kinase	-
NYE42_RS02040 (NYE42_02035)	ceuB	434409..435362 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
NYE42_RS02045 (NYE42_02040)	-	435352..436299 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
NYE42_RS02050 (NYE42_02045)	-	436293..437051 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=986106 NYE42_RS02020 WP_007410270.1 431042..432190(+) (rapC) [Bacillus sp. FSL K6-2865]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=986106 NYE42_RS02020 WP_007410270.1 431042..432190(+) (rapC) [Bacillus sp. FSL K6-2865]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGTTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568