Detailed information NTG0985594

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHH65_RS16610
• Genome accession: NZ_CP152026
• Coordinates: 3201818..3202474 (-)
• Length: 218 a.a.
• NCBI ID: WP_227001684.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL L8-0654
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3196818..3207474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHH65_RS16575 (MHH65_16575)	fliW	3196956..3197390 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
MHH65_RS16580 (MHH65_16580)	-	3197419..3197997 (-)	579	WP_024426253.1	DUF6470 family protein	-
MHH65_RS16585 (MHH65_16585)	flgL	3198044..3198952 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
MHH65_RS16590 (MHH65_16590)	flgK	3198962..3200482 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
MHH65_RS16595 (MHH65_16595)	-	3200498..3200980 (-)	483	WP_024423619.1	flagellar protein FlgN	-
MHH65_RS16600 (MHH65_16600)	flgM	3200999..3201262 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHH65_RS16605 (MHH65_16605)	-	3201342..3201761 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
MHH65_RS16610 (MHH65_16610)	comFC	3201818..3202474 (-)	657	WP_227001684.1	ComF family protein	Machinery gene
MHH65_RS16615 (MHH65_16615)	-	3202501..3202794 (-)	294	WP_024423623.1	competence protein ComFB	-
MHH65_RS16620 (MHH65_16620)	comFA	3202843..3204240 (-)	1398	WP_141545669.1	DEAD/DEAH box helicase	Machinery gene
MHH65_RS16625 (MHH65_16625)	-	3204361..3205203 (-)	843	WP_024423625.1	DegV family protein	-
MHH65_RS16630 (MHH65_16630)	degU	3205419..3206108 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHH65_RS16635 (MHH65_16635)	degS	3206173..3207348 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24868.96 Da
• Isoelectric Point: 9.9287

>NTDB_id=985594 MHH65_RS16610 WP_227001684.1 3201818..3202474(-) (comFC) [Bacillus sp. FSL L8-0654]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNSWNERSDSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAVVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=985594 MHH65_RS16610 WP_227001684.1 3201818..3202474(-) (comFC) [Bacillus sp. FSL L8-0654]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAACGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGGTTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362