Detailed information NTG0985532

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHH75_RS16880
• Genome accession: NZ_CP152025
• Coordinates: 3235990..3236646 (-)
• Length: 218 a.a.
• NCBI ID: WP_251232415.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL L8-0661
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3230990..3241646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHH75_RS16845 (MHH75_16845)	fliW	3231128..3231562 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
MHH75_RS16850 (MHH75_16850)	-	3231591..3232169 (-)	579	WP_024423616.1	DUF6470 family protein	-
MHH75_RS16855 (MHH75_16855)	flgL	3232216..3233124 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
MHH75_RS16860 (MHH75_16860)	flgK	3233134..3234654 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
MHH75_RS16865 (MHH75_16865)	-	3234670..3235152 (-)	483	WP_024423619.1	flagellar protein FlgN	-
MHH75_RS16870 (MHH75_16870)	flgM	3235171..3235434 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHH75_RS16875 (MHH75_16875)	-	3235514..3235933 (-)	420	WP_120207796.1	TIGR03826 family flagellar region protein	-
MHH75_RS16880 (MHH75_16880)	comFC	3235990..3236646 (-)	657	WP_251232415.1	ComF family protein	Machinery gene
MHH75_RS16885 (MHH75_16885)	-	3236673..3236966 (-)	294	WP_024423623.1	competence protein ComFB	-
MHH75_RS16890 (MHH75_16890)	comFA	3237015..3238412 (-)	1398	WP_142925562.1	DEAD/DEAH box helicase	Machinery gene
MHH75_RS16895 (MHH75_16895)	-	3238533..3239375 (-)	843	WP_024423625.1	DegV family protein	-
MHH75_RS16900 (MHH75_16900)	degU	3239591..3240280 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHH75_RS16905 (MHH75_16905)	degS	3240345..3241520 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24883.03 Da
• Isoelectric Point: 10.0278

>NTDB_id=985532 MHH75_RS16880 WP_251232415.1 3235990..3236646(-) (comFC) [Bacillus sp. FSL L8-0661]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCKSWNERSDSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAVVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=985532 MHH75_RS16880 WP_251232415.1 3235990..3236646(-) (comFC) [Bacillus sp. FSL L8-0661]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAACGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAAGAGTTGGAATG
AACGCTCTGATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGGTTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362