Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   NYE28_RS16530 Genome accession   NZ_CP152013
Coordinates   3279556..3281847 (-) Length   763 a.a.
NCBI ID   WP_160223246.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0443     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3274556..3286847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE28_RS16490 (NYE28_16490) - 3275016..3275447 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  NYE28_RS16495 (NYE28_16495) - 3275447..3275788 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  NYE28_RS16500 (NYE28_16500) - 3275781..3277262 (+) 1482 WP_080130026.1 Na+/H+ antiporter subunit D -
  NYE28_RS16505 (NYE28_16505) - 3277268..3277744 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  NYE28_RS16510 (NYE28_16510) - 3277744..3278028 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  NYE28_RS16515 (NYE28_16515) mnhG 3278012..3278386 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  NYE28_RS16520 (NYE28_16520) - 3278426..3278809 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  NYE28_RS16525 (NYE28_16525) comA 3278831..3279475 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  NYE28_RS16530 (NYE28_16530) comP 3279556..3281847 (-) 2292 WP_160223246.1 histidine kinase Regulator
  NYE28_RS16535 (NYE28_16535) comX 3281859..3282023 (-) 165 WP_061581461.1 competence pheromone ComX -
  NYE28_RS16540 (NYE28_16540) - 3282023..3282901 (-) 879 WP_038460875.1 polyprenyl synthetase family protein -
  NYE28_RS16545 (NYE28_16545) degQ 3283086..3283226 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  NYE28_RS16550 (NYE28_16550) - 3283691..3284032 (+) 342 WP_025285192.1 hypothetical protein -
  NYE28_RS16555 (NYE28_16555) - 3284039..3285262 (-) 1224 WP_342490171.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88470.70 Da        Isoelectric Point: 7.3985

>NTDB_id=984922 NYE28_RS16530 WP_160223246.1 3279556..3281847(-) (comP) [Bacillus sp. FSL R5-0443]
MKSKYNKVSVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=984922 NYE28_RS16530 WP_160223246.1 3279556..3281847(-) (comP) [Bacillus sp. FSL R5-0443]
ATGAAGTCCAAGTACAATAAGGTTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGCTTCTTCATCATTA
AAATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGATCGGCAAAAGGCGATTTGCTTAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACCGACCAGGCACATATTAT
AAAAGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTGATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTTTCTGAAAGGTTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTCTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGCAATCAGGAA
GAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544

Multiple sequence alignment