Detailed information NTG0983948

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NSQ70_RS16275
• Genome accession: NZ_CP151992
• Coordinates: 3159500..3160675 (-)
• Length: 391 a.a.
• NCBI ID: WP_008360205.1
• Uniprot ID: A0AAC9NCV1
• Organism: Bacillus sp. FSL R5-0397
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3154500..3165675

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ70_RS16245 (NSQ70_16245)	-	3154676..3155095 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NSQ70_RS16250 (NSQ70_16250)	comFC	3155152..3155733 (-)	582	WP_342502276.1	ComF family protein	Machinery gene
NSQ70_RS16255 (NSQ70_16255)	-	3155835..3156128 (-)	294	WP_008348267.1	competence protein ComFB	-
NSQ70_RS16260 (NSQ70_16260)	comFA	3156193..3157320 (-)	1128	WP_251185086.1	DEAD/DEAH box helicase	Machinery gene
NSQ70_RS16265 (NSQ70_16265)	-	3157692..3158534 (-)	843	WP_024719242.1	DegV family protein	-
NSQ70_RS16270 (NSQ70_16270)	degU	3158746..3159435 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ70_RS16275 (NSQ70_16275)	degS	3159500..3160675 (-)	1176	WP_008360205.1	sensor histidine kinase	Regulator
NSQ70_RS16280 (NSQ70_16280)	-	3160897..3161565 (+)	669	WP_251185087.1	YigZ family protein	-
NSQ70_RS16285 (NSQ70_16285)	-	3161550..3162647 (+)	1098	WP_144679134.1	LCP family protein	-
NSQ70_RS16290 (NSQ70_16290)	-	3162686..3163753 (-)	1068	WP_007499956.1	MraY family glycosyltransferase	-
NSQ70_RS16295 (NSQ70_16295)	-	3163888..3165084 (-)	1197	WP_041508115.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=983948 NSQ70_RS16275 WP_008360205.1 3159500..3160675(-) (degS) [Bacillus sp. FSL R5-0397]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=983948 NSQ70_RS16275 WP_008360205.1 3159500..3160675(-) (degS) [Bacillus sp. FSL R5-0397]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTGGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.714	98.465	0.844