Detailed information NTG0983191

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACN3VN_RS08560
• Genome accession: NZ_CP183396
• Coordinates: 1847513..1848793 (-)
• Length: 426 a.a.
• NCBI ID: WP_010893699.1
• Uniprot ID: Q9PE40
• Organism: Xylella fastidiosa strain CFBP8074
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1842513..1853793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN3VN_RS08550 (ACN3VN_08550)	-	1844384..1844668 (-)	285	WP_046419069.1	HU family DNA-binding protein	-
ACN3VN_RS08555 (ACN3VN_08555)	lon	1844889..1847360 (-)	2472	WP_046419066.1	endopeptidase La	-
ACN3VN_RS08560 (ACN3VN_08560)	clpX	1847513..1848793 (-)	1281	WP_010893699.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACN3VN_RS08565 (ACN3VN_08565)	clpP	1848921..1849547 (-)	627	WP_058569219.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACN3VN_RS08570 (ACN3VN_08570)	tig	1849682..1850992 (-)	1311	WP_058569220.1	trigger factor	-
ACN3VN_RS08580 (ACN3VN_08580)	-	1852901..1853362 (+)	462	WP_004086550.1	hypothetical protein	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 47076.07 Da
• Isoelectric Point: 5.4589

>NTDB_id=983191 ACN3VN_RS08560 WP_010893699.1 1847513..1848793(-) (clpX) [Xylella fastidiosa strain CFBP8074]
MSEDRPSRSGDGNKILYCSFCGKSQREVRKLIAGPSVFICDECVELCNDIIREELEEKSQSARSSLPKPKEILEVLDQYV
IGQQRAKRTLAVAVYNHYKRIESRHKNDDIELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVERAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSSESKRDVGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELD
ESALVKILTEPKNAITKQFKKLFEMENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYELPSQEGISKVVV
DESVIENKSEPYLIYQTMPAKVASGE

Nucleotide

• Length: 1281 bp

>NTDB_id=983191 ACN3VN_RS08560 WP_010893699.1 1847513..1848793(-) (clpX) [Xylella fastidiosa strain CFBP8074]
ATGAGCGAAGACCGGCCAAGCCGTTCTGGTGACGGAAATAAGATTCTTTACTGCTCATTCTGCGGTAAAAGTCAGCGTGA
GGTTCGCAAGCTGATCGCAGGTCCAAGCGTATTCATTTGTGATGAATGCGTTGAGTTGTGTAACGATATTATTCGCGAGG
AACTGGAAGAGAAGTCGCAATCTGCGCGTTCCAGTTTGCCTAAGCCCAAGGAGATCCTTGAGGTTTTGGATCAGTATGTC
ATTGGCCAGCAGCGTGCTAAGAGGACTCTTGCTGTAGCCGTGTACAACCATTATAAACGGATCGAAAGTCGGCATAAGAA
TGACGACATCGAATTGGCTAAATCTAATATTTTGTTGGTTGGCCCAACAGGCTCGGGCAAGACGTTGCTTGCCGAGACAT
TGGCGCGTTTGCTGAATGTGCCTTTCACGATTGCCGATGCAACCACATTGACTGAGGCTGGCTATGTTGGTGAGGACGTG
GAGAATATCATTCAGAAGTTGTTACAGAAGTGTGATTACGACGTTGAAAGGGCGCAGCATGGGATCGTCTACATTGATGA
AATAGATAAGATTTCCCGTAAGAGTGAGAATCCATCAATTACCCGGGATGTTTCTGGTGAGGGTGTGCAGCAGGCATTGC
TGAAATTGATCGAAGGTACGGTTGCTTCTGTGCCTCCTCAGGGTGGTCGCAAGCATCCACAGCAGGAATTCCTGCAGGTC
GATACCAAAAATATTTTATTCATCTGTGGCGGTGCTTTTGCTGGTCTAGATAAGGTGATCCAACAGCGTTGCACTGAAGC
TGGTGGTATTGGCTTTGGTGTTAAGGTCAAAAGTTCAGAGAGTAAGCGCGATGTTGGTAAGGTACTAGCTGGTGTCGAGC
CGGAGGACCTGATTAAGTTTGGGTTAATCCCTGAATTCGTTGGGCGATTGCCAGTTGTAGCTACACTTGATGAGCTGGAT
GAGTCGGCTTTGGTTAAAATTTTAACCGAGCCAAAGAACGCTATTACAAAGCAGTTCAAAAAGCTGTTTGAGATGGAGAA
CGTAGAGTTGGAATTCCGTCAGGACGCGCTTTCAGCAGTGGCTAGGAAAGCTCTTAAGCGCAAGACTGGTGCGCGTGGTC
TCCGTACTATTGTTGAGTTGGTTCTGCTGGATACCATGTACGAACTTCCTTCTCAGGAAGGTATTAGTAAGGTTGTTGTC
GATGAATCGGTTATTGAAAATAAATCTGAGCCTTATCTGATTTATCAAACGATGCCTGCAAAGGTTGCTTCCGGCGAATG
A

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (16-53)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-396)

3D structure

• AlphaFold DB: Q9PE40

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.75	93.897	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.528	93.427	0.519