Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | NST13_RS02515 | Genome accession | NZ_CP151979 |
| Coordinates | 502815..503120 (+) | Length | 101 a.a. |
| NCBI ID | WP_342469564.1 | Uniprot ID | - |
| Organism | Ureibacillus sp. FSL W7-1570 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 497815..508120
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST13_RS02485 (NST13_02485) | - | 498331..498507 (-) | 177 | WP_342581321.1 | DUF2759 domain-containing protein | - |
| NST13_RS02490 (NST13_02490) | - | 498713..499351 (+) | 639 | WP_342471307.1 | MBL fold metallo-hydrolase | - |
| NST13_RS02495 (NST13_02495) | - | 499407..499649 (-) | 243 | WP_342469568.1 | DUF2626 family protein | - |
| NST13_RS02500 (NST13_02500) | - | 499764..500465 (-) | 702 | WP_342581322.1 | helix-turn-helix domain-containing protein | - |
| NST13_RS02505 (NST13_02505) | comGA | 500731..501753 (+) | 1023 | WP_342581323.1 | competence type IV pilus ATPase ComGA | - |
| NST13_RS02510 (NST13_02510) | comGB | 501734..502801 (+) | 1068 | WP_342469565.1 | competence type IV pilus assembly protein ComGB | - |
| NST13_RS02515 (NST13_02515) | comGC | 502815..503120 (+) | 306 | WP_342469564.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NST13_RS02520 (NST13_02520) | comGD | 503136..503564 (+) | 429 | WP_342581324.1 | competence type IV pilus minor pilin ComGD | - |
| NST13_RS02525 (NST13_02525) | - | 503554..503889 (+) | 336 | WP_342581325.1 | hypothetical protein | - |
| NST13_RS02530 (NST13_02530) | comGF | 503838..504287 (+) | 450 | WP_342469561.1 | competence type IV pilus minor pilin ComGF | - |
| NST13_RS02535 (NST13_02535) | - | 504472..504984 (+) | 513 | WP_342581326.1 | shikimate kinase | - |
| NST13_RS02540 (NST13_02540) | gcvT | 505372..506475 (+) | 1104 | WP_342581327.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST13_RS02545 (NST13_02545) | gcvPA | 506493..507839 (+) | 1347 | WP_342469558.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 11518.59 Da Isoelectric Point: 5.1129
>NTDB_id=983127 NST13_RS02515 WP_342469564.1 502815..503120(+) (comGC) [Ureibacillus sp. FSL W7-1570]
MKNQKGFTLIEMLIVLFIISILILITVPNIMKHMNTIDDKGCKAYVQMVQGQVESYRMEHKTIPTLDDLVEKEYLKEGME
KCPNGMDIEIQSDGTVNVAKN
MKNQKGFTLIEMLIVLFIISILILITVPNIMKHMNTIDDKGCKAYVQMVQGQVESYRMEHKTIPTLDDLVEKEYLKEGME
KCPNGMDIEIQSDGTVNVAKN
Nucleotide
Download Length: 306 bp
>NTDB_id=983127 NST13_RS02515 WP_342469564.1 502815..503120(+) (comGC) [Ureibacillus sp. FSL W7-1570]
ATGAAAAATCAGAAAGGTTTCACATTGATCGAGATGCTGATCGTGCTGTTTATCATTTCCATCCTGATTTTGATCACTGT
TCCAAACATCATGAAACACATGAATACGATTGATGACAAAGGTTGCAAGGCGTACGTGCAGATGGTGCAGGGCCAGGTGG
AATCTTACCGAATGGAACACAAAACCATTCCCACATTGGACGATTTGGTAGAAAAAGAATATTTGAAAGAAGGGATGGAG
AAATGTCCAAATGGAATGGATATTGAAATTCAATCGGACGGAACGGTTAATGTGGCCAAAAATTGA
ATGAAAAATCAGAAAGGTTTCACATTGATCGAGATGCTGATCGTGCTGTTTATCATTTCCATCCTGATTTTGATCACTGT
TCCAAACATCATGAAACACATGAATACGATTGATGACAAAGGTTGCAAGGCGTACGTGCAGATGGTGCAGGGCCAGGTGG
AATCTTACCGAATGGAACACAAAACCATTCCCACATTGGACGATTTGGTAGAAAAAGAATATTTGAAAGAAGGGATGGAG
AAATGTCCAAATGGAATGGATATTGAAATTCAATCGGACGGAACGGTTAATGTGGCCAAAAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
50.515 |
96.04 |
0.485 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
40.196 |
100 |
0.406 |
| comGC | Staphylococcus aureus MW2 |
42.105 |
94.059 |
0.396 |
| comGC | Staphylococcus aureus N315 |
42.105 |
94.059 |
0.396 |