Detailed information NTG0983076

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACN20J_RS17930
• Genome accession: NZ_CP183383
• Coordinates: 4074501..4075787 (-)
• Length: 428 a.a.
• NCBI ID: WP_143632143.1
• Uniprot ID: -
• Organism: Streptomyces sp. 2-1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4069501..4080787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN20J_RS17915 (ACN20J_17910)	-	4070758..4072227 (-)	1470	WP_419666292.1	RNA-guided endonuclease InsQ/TnpB family protein	-
ACN20J_RS17920 (ACN20J_17915)	tnpA	4072335..4072937 (+)	603	WP_362001658.1	IS200/IS605 family transposase	-
ACN20J_RS17925 (ACN20J_17920)	-	4073024..4073959 (+)	936	WP_419666293.1	hypothetical protein	-
ACN20J_RS17930 (ACN20J_17925)	clpX	4074501..4075787 (-)	1287	WP_143632143.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACN20J_RS17935 (ACN20J_17930)	clpP	4075948..4076628 (-)	681	WP_189837851.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACN20J_RS17940 (ACN20J_17935)	clpP	4076731..4077336 (-)	606	WP_189838477.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACN20J_RS17945 (ACN20J_17940)	tig	4077844..4079244 (-)	1401	WP_419666294.1	trigger factor	-
ACN20J_RS17960 (ACN20J_17955)	-	4079852..4080691 (-)	840	WP_419666295.1	alpha/beta fold hydrolase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46949.77 Da
• Isoelectric Point: 4.8346

>NTDB_id=983076 ACN20J_RS17930 WP_143632143.1 4074501..4075787(-) (clpX) [Streptomyces sp. 2-1]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSAGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREMESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREAMEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=983076 ACN20J_RS17930 WP_143632143.1 4074501..4075787(-) (clpX) [Streptomyces sp. 2-1]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAAACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAACCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGTCC
GCCAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACAGCGCAGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTCCTCGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCCACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
TGAGATCGACAAGGTGGCTCGTAAGAGCGAAAACCCGTCGATCACGCGGGATGTGAGCGGCGAGGGTGTCCAGCAGGCCC
TGTTGAAGATCCTCGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTGATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTCGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACTTCGGTGCACAACCTCGACCGC
GAGGCCCTCCTCCAGATCCTCGTCGAGCCCCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCATGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGAGGCAGTCCGCTCGAACGTGAACCCGACCCTGATCCCGCGGGACGCGCGGGGGCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519