Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSQ60_RS04045 Genome accession   NZ_CP151976
Coordinates   818614..819405 (+) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus sp. FSL W8-0502     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 813614..824405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ60_RS04010 (NSQ60_04010) - 813700..814248 (+) 549 WP_034283751.1 thioredoxin family protein -
  NSQ60_RS04015 (NSQ60_04015) - 814582..815049 (+) 468 WP_041116252.1 DUF393 domain-containing protein -
  NSQ60_RS04020 (NSQ60_04020) - 815086..816342 (-) 1257 WP_034283753.1 transcriptional regulator -
  NSQ60_RS04025 (NSQ60_04025) - 816617..817204 (+) 588 WP_046314306.1 nitroreductase -
  NSQ60_RS04030 (NSQ60_04030) - 817243..817398 (-) 156 WP_024425223.1 YfhD family protein -
  NSQ60_RS04035 (NSQ60_04035) - 817460..817570 (-) 111 WP_017358836.1 YfhE family protein -
  NSQ60_RS04040 (NSQ60_04040) - 817623..818519 (-) 897 WP_046314308.1 TIGR01777 family oxidoreductase -
  NSQ60_RS04045 (NSQ60_04045) recX 818614..819405 (+) 792 WP_024425808.1 recombination regulator RecX Regulator
  NSQ60_RS04050 (NSQ60_04050) - 819409..819723 (+) 315 WP_046314310.1 YfhH family protein -
  NSQ60_RS04055 (NSQ60_04055) - 819949..820122 (-) 174 WP_008360604.1 YpzG family protein -
  NSQ60_RS04060 (NSQ60_04060) - 820148..820297 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  NSQ60_RS04065 (NSQ60_04065) - 820414..820686 (+) 273 WP_024425219.1 YfhJ family protein -
  NSQ60_RS04070 (NSQ60_04070) - 820987..821970 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=982945 NSQ60_RS04045 WP_024425808.1 818614..819405(+) (recX) [Bacillus sp. FSL W8-0502]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=982945 NSQ60_RS04045 WP_024425808.1 818614..819405(+) (recX) [Bacillus sp. FSL W8-0502]
ATGCCTTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCAGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTGTCTCAATACCCTGATGACCTACAGCTGGAGGAA
GCGGTAAAGCAGGTTCTCAAACTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639

Multiple sequence alignment