Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACN2AT_RS20515 Genome accession   NZ_CP183238
Coordinates   3961281..3961970 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain NDmed     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3956281..3966970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN2AT_RS20495 (ACN2AT_20390) yxeA 3957186..3957533 (-) 348 WP_003227084.1 YxeA family protein -
  ACN2AT_RS20500 (ACN2AT_20395) yxdM 3957547..3959415 (-) 1869 WP_003244410.1 ABC transporter permease YxdM -
  ACN2AT_RS20505 (ACN2AT_20400) yxdL 3959390..3960163 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  ACN2AT_RS20510 (ACN2AT_20405) yxdK 3960307..3961284 (-) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  ACN2AT_RS20515 (ACN2AT_20410) braR 3961281..3961970 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  ACN2AT_RS20520 (ACN2AT_20415) iolJ 3962078..3962950 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  ACN2AT_RS20525 (ACN2AT_20420) iolI 3962971..3963807 (-) 837 WP_003244546.1 2-keto-myo-inositol isomerase -
  ACN2AT_RS20530 (ACN2AT_20425) iolH 3963893..3964762 (-) 870 WP_003243149.1 sugar phosphate isomerase/epimerase family protein -
  ACN2AT_RS20535 (ACN2AT_20430) iolG 3964782..3965816 (-) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=982863 ACN2AT_RS20515 WP_003243527.1 3961281..3961970(-) (braR) [Bacillus subtilis strain NDmed]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=982863 ACN2AT_RS20515 WP_003243527.1 3961281..3961970(-) (braR) [Bacillus subtilis strain NDmed]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment