Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NSS78_RS14760 Genome accession   NZ_CP151974
Coordinates   2886582..2887223 (-) Length   213 a.a.
NCBI ID   WP_003213500.1    Uniprot ID   A0AB34QVB6
Organism   Bacillus sp. FSL W8-0920     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2881582..2892223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS78_RS14725 (NSS78_14725) - 2882715..2883146 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  NSS78_RS14730 (NSS78_14730) - 2883146..2883487 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  NSS78_RS14735 (NSS78_14735) - 2883480..2884958 (+) 1479 WP_309215906.1 Na+/H+ antiporter subunit D -
  NSS78_RS14740 (NSS78_14740) - 2884965..2885444 (+) 480 WP_044140819.1 Na+/H+ antiporter subunit E -
  NSS78_RS14745 (NSS78_14745) - 2885444..2885725 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  NSS78_RS14750 (NSS78_14750) mnhG 2885709..2886083 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  NSS78_RS14755 (NSS78_14755) - 2886169..2886558 (-) 390 WP_106066313.1 hotdog fold thioesterase -
  NSS78_RS14760 (NSS78_14760) comA 2886582..2887223 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  NSS78_RS14765 (NSS78_14765) comP 2887304..2889616 (-) 2313 WP_340866486.1 ATP-binding protein Regulator
  NSS78_RS14770 (NSS78_14770) comX 2889671..2889841 (-) 171 WP_212045489.1 competence pheromone ComX -
  NSS78_RS14775 (NSS78_14775) - 2889838..2890752 (-) 915 WP_212045490.1 polyprenyl synthetase family protein -
  NSS78_RS14780 (NSS78_14780) degQ 2890904..2891044 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NSS78_RS14785 (NSS78_14785) - 2891550..2891903 (+) 354 WP_339205997.1 inner spore coat protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24155.54 Da        Isoelectric Point: 4.5204

>NTDB_id=982862 NSS78_RS14760 WP_003213500.1 2886582..2887223(-) (comA) [Bacillus sp. FSL W8-0920]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQETDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=982862 NSS78_RS14760 WP_003213500.1 2886582..2887223(-) (comA) [Bacillus sp. FSL W8-0920]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTCTAGAAACCAACCAACAAGTGAAAATCATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCCATTCGGGCTGGATTGCACGGTGCAATTAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGGAGACCGATCACGAGCTGTTAACAGAGCGAGAGTGTTTGATC
CTCAGAGAAGTGGAAAAAGGATACACGAACCAAGAGATTGCCGATGTGCTGCATTTGAGCAAACGCTCGATTGAATACAG
CTTGACGTCCATCTTTAATAAGCTGAATGTTGGCTCTCGAACCGAAGCGGTTTTAATTGCAAAATCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.028

100

0.714

Multiple sequence alignment