Detailed information NTG0982670

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSS65_RS16945
• Genome accession: NZ_CP151970
• Coordinates: 3243366..3244022 (-)
• Length: 218 a.a.
• NCBI ID: WP_260983460.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-1006
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3238366..3249022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSS65_RS16910 (NSS65_16910)	fliW	3238504..3238938 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NSS65_RS16915 (NSS65_16915)	-	3238967..3239545 (-)	579	WP_024426253.1	DUF6470 family protein	-
NSS65_RS16920 (NSS65_16920)	flgL	3239592..3240500 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NSS65_RS16925 (NSS65_16925)	flgK	3240510..3242030 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSS65_RS16930 (NSS65_16930)	-	3242046..3242528 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSS65_RS16935 (NSS65_16935)	flgM	3242547..3242810 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSS65_RS16940 (NSS65_16940)	-	3242890..3243309 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NSS65_RS16945 (NSS65_16945)	comFC	3243366..3244022 (-)	657	WP_260983460.1	ComF family protein	Machinery gene
NSS65_RS16950 (NSS65_16950)	-	3244049..3244342 (-)	294	WP_024423623.1	competence protein ComFB	-
NSS65_RS16955 (NSS65_16955)	comFA	3244391..3245791 (-)	1401	WP_309300290.1	DEAD/DEAH box helicase	Machinery gene
NSS65_RS16960 (NSS65_16960)	-	3245909..3246751 (-)	843	WP_024423625.1	DegV family protein	-
NSS65_RS16965 (NSS65_16965)	degU	3246967..3247656 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSS65_RS16970 (NSS65_16970)	degS	3247721..3248896 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24841.89 Da
• Isoelectric Point: 9.9148

>NTDB_id=982670 NSS65_RS16945 WP_260983460.1 3243366..3244022(-) (comFC) [Bacillus sp. FSL K6-1006]
MPAFTWKSFLLLNDDRLCVACKNHLVKIDRPICPTCGRAQSNDQLCQDCNSWNERSDSTKVLVKNRSVYTYNDLMKDVLA
RFKFRGDTALAELFKKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=982670 NSS65_RS16945 WP_260983460.1 3243366..3244022(-) (comFC) [Bacillus sp. FSL K6-1006]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGATCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTACTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAATGATTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.463	99.083	0.5
comFC/cflB	Streptococcus pneumoniae TIGR4	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae Rx1	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae D39	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae R6	37.209	98.624	0.367