Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   NYE49_RS19250 Genome accession   NZ_CP151962
Coordinates   3746806..3746925 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. FSL L8-0358     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3741806..3751925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE49_RS19225 (NYE49_19225) albG 3741972..3742673 (+) 702 WP_015384931.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  NYE49_RS19230 (NYE49_19230) - 3742679..3744052 (-) 1374 WP_047183346.1 YncE family protein -
  NYE49_RS19235 (NYE49_19235) - 3744092..3745447 (-) 1356 WP_342410638.1 YncE family protein -
  NYE49_RS19240 (NYE49_19240) - 3745444..3745674 (-) 231 Protein_3733 hypothetical protein -
  NYE49_RS19245 (NYE49_19245) rapF 3745677..3746822 (+) 1146 WP_342410640.1 response regulator aspartate phosphatase RapF Regulator
  NYE49_RS19250 (NYE49_19250) phrF 3746806..3746925 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  NYE49_RS19255 (NYE49_19255) - 3747023..3747480 (+) 458 Protein_3736 YbaK/EbsC family protein -
  NYE49_RS19260 (NYE49_19260) speB 3747518..3748390 (-) 873 WP_003227545.1 agmatinase -
  NYE49_RS19265 (NYE49_19265) speE 3748451..3749281 (-) 831 WP_003227543.1 spermidine synthase -
  NYE49_RS19270 (NYE49_19270) - 3749483..3751558 (+) 2076 WP_047183351.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=982372 NYE49_RS19250 WP_009968329.1 3746806..3746925(+) (phrF) [Bacillus sp. FSL L8-0358]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=982372 NYE49_RS19250 WP_009968329.1 3746806..3746925(+) (phrF) [Bacillus sp. FSL L8-0358]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATCTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment