Detailed information NTG0982371

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NYE49_RS19245
• Genome accession: NZ_CP151962
• Coordinates: 3745677..3746822 (+)
• Length: 381 a.a.
• NCBI ID: WP_342410640.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL L8-0358
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3740677..3751822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE49_RS19220 (NYE49_19220)	-	3740695..3741975 (+)	1281	WP_015483836.1	pitrilysin family protein	-
NYE49_RS19225 (NYE49_19225)	albG	3741972..3742673 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NYE49_RS19230 (NYE49_19230)	-	3742679..3744052 (-)	1374	WP_047183346.1	YncE family protein	-
NYE49_RS19235 (NYE49_19235)	-	3744092..3745447 (-)	1356	WP_342410638.1	YncE family protein	-
NYE49_RS19240 (NYE49_19240)	-	3745444..3745674 (-)	231	Protein_3733	hypothetical protein	-
NYE49_RS19245 (NYE49_19245)	rapF	3745677..3746822 (+)	1146	WP_342410640.1	response regulator aspartate phosphatase RapF	Regulator
NYE49_RS19250 (NYE49_19250)	phrF	3746806..3746925 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NYE49_RS19255 (NYE49_19255)	-	3747023..3747480 (+)	458	Protein_3736	YbaK/EbsC family protein	-
NYE49_RS19260 (NYE49_19260)	speB	3747518..3748390 (-)	873	WP_003227545.1	agmatinase	-
NYE49_RS19265 (NYE49_19265)	speE	3748451..3749281 (-)	831	WP_003227543.1	spermidine synthase	-
NYE49_RS19270 (NYE49_19270)	-	3749483..3751558 (+)	2076	WP_047183351.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45596.11 Da
• Isoelectric Point: 5.2457

>NTDB_id=982371 NYE49_RS19245 WP_342410640.1 3745677..3746822(+) (rapF) [Bacillus sp. FSL L8-0358]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDLIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=982371 NYE49_RS19245 WP_342410640.1 3745677..3746822(+) (rapF) [Bacillus sp. FSL L8-0358]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCTGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (142-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575